Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0921 ATGAGGCCTCAGCATGTTGAAGATGGTGATCATGAACACCATAGTAATGATAATAAGAACATTAACTCTTCATTTTCAACAACTGCTTATCACTTGGAGAGAGTTTTCCCTGTTTATGCCATGGGAATTCCAAACCCATCACACTCTTCTGCCTTTCATAATAACCATTTGGATATTTCTCTTCAAACCATTTGGGATCATATAAGAGAAGAAGCCAGGTTTGAGGCAGAAAGGGAACCAATTTTGAGTAGCTTCATGTATGCAAGTATTTTGTCACATGATTGCTTAGAGCAAGCACTAGCATCTGTTCTTGCAAATCGTCTCCAAAATCCTACTCTTTTGGCAACTCAGTTAATGGATATCTTTTTCAATCTCCTAATGCATGACGAATCTATCCGAAGATCTATTCGTTTAGATCTCAAGGCATTTAAAGACAGAGGTCCTTCTTGTGTGTCATATTGCTCTACACTTTTGAATAGAAAGGGTTACCATTCTTTGCAAGTGTACCGTGTAGCGCACGCTTTATGGGGCGAGGGTCGAAAGGTATTGGCTTTAACTTTGCAAAGTAGAGTTAGTGAGGTTTTCGGCATTGATATACATCCCGCTGCAAAAATAGGAGATGAAATTCTATTAGATCATGGAACACGTGTGGTTATTGGTGAAACTGCCATTGTTGGAAACAGAGTCTCATTGATGCAAGGTGTGACTTTAGGAGAAACAGGGAAAGAAGGGGGTGATAGGCATCCCAAAGTAGCAGAAGGTGTTCTAGTTGGGGCAAGTGCAATCATACTTGGTAACATAAGAATTGGTGAAGGTGTTAAGATTGTTGCTGGTTCTCTTGTCTTGAAAGATGTTCCTCCCCATAGCATTGTGGCAGGTGTACCAGCACATGTTATTGGGCGCTTAAATGAGCATGATCCATCTTTAACCATGAAGCATGATGCTACAAAAGAATTTTGA 960 0.4021 MRPQHVEDGDHEHHSNDNKNINSSFSTTAYHLERVFPVYAMGIPNPSHSSAFHNNHLDISLQTIWDHIREEARFEAEREPILSSFMYASILSHDCLEQALASVLANRLQNPTLLATQLMDIFFNLLMHDESIRRSIRLDLKAFKDRGPSCVSYCSTLLNRKGYHSLQVYRVAHALWGEGRKVLALTLQSRVSEVFGIDIHPAAKIGDEILLDHGTRVVIGETAIVGNRVSLMQGVTLGETGKEGGDRHPKVAEGVLVGASAIILGNIRIGEGVKIVAGSLVLKDVPPHSIVAGVPAHVIGRLNEHDPSLTMKHDATKEF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0921 319 Gene3D serine acetyltransferase, domain 1 46 197 IPR042122 -
Amo01g0921 319 PANTHER SERINE ACETYLTRANSFERASE 10 319 - -
Amo01g0921 319 Pfam Serine acetyltransferase, N-terminal 64 167 IPR010493 GO:0005737|GO:0006535|GO:0009001
Amo01g0921 319 CDD LbH_SAT 195 295 IPR045304 -
Amo01g0921 319 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 10 319 - -
Amo01g0921 319 MobiDBLite consensus disorder prediction 1 22 - -
Amo01g0921 319 SUPERFAMILY Trimeric LpxA-like enzymes 63 312 IPR011004 -
Amo01g0921 319 Gene3D Hexapeptide repeat proteins 198 318 - -
Amo01g0921 319 SMART SATase_N_2_a 64 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Amo01g0921 319 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0921 Amo-Chr1 12339240 12342130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0921 32 319 Miscellaneous Gene Families AT2G17640 68.403 2.47e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0921 K00640 - qsu:112040636 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0305 05 3772469 3776558 Amo01g0921 01 12339240 12342130 PCT
Amo01g0921 01 12339240 12342130 Amo05g0131 05 1567041 1570047 PCT