Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0893 ACAAAAACTAGTCCAAATGAGAATTTGGAGGGTAAAAAAGTTCCAACTTCGGTGCCCGTTGGCGTCGCGCATGGCCTTCTTCAAGCCGGATATCGCTATTTGGATGTCAGGACCATTGAAGAGTTCAGTGCAGGTCACACTCCAGGTGCCATTAACATCCCTTACCTTCACAAAATTGGAGAAGATATGACAAAAAACGCTGATTTCATTGAACAAGTCTCATCCCAATTCAGCAAACATGACAAAATCGTTGTTGGGTGTAAGAGCGGTAAGAGGTCTAAGATGGCTGCTACAGACTTATTAGATGCTGGATTTAGTGGAGTTAAAGATGTGGCTGGTGGTTATGATGATTGGACCCAAAATGGACTTCCAACACAAATATAA 384 0.4271 TKTSPNENLEGKKVPTSVPVGVAHGLLQAGYRYLDVRTIEEFSAGHTPGAINIPYLHKIGEDMTKNADFIEQVSSQFSKHDKIVVGCKSGKRSKMAATDLLDAGFSGVKDVAGGYDDWTQNGLPTQI* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0893 127 Gene3D - 3 126 IPR036873 -
Amo01g0893 127 ProSiteProfiles Rhodanese domain profile. 27 127 IPR001763 -
Amo01g0893 127 SMART rhod_4 18 124 IPR001763 -
Amo01g0893 127 CDD RHOD 26 118 - -
Amo01g0893 127 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 15 125 IPR036873 -
Amo01g0893 127 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 4 126 - -
Amo01g0893 127 Pfam Rhodanese-like domain 32 120 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0893 Amo-Chr1 12123737 12126746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0893 17 124 Sulfurtransferasese or Rhodanese AT5G66170 47.273 1.35e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0893 - - twl:120002437 177.948