Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0886 ATGCTATCAAAATTTATGGACTTTCTGGTTGCCTGCTGGCGGCGACGATCATCGCCGGATCGAAAGGGCTCCGATGTCTCCGGCGGGCGGAAGGAGGGTTTGCTGTGGTACAAGGATTGCGGGCAGCATCTGTTTGGTGAATTCTCTATGGCTGTGGTTCAGGCCAACAACTTGCTTGAGGATCAGAGCCAGATTGAGTCTGGTCCCTTAAGCTTGCTTGACACTGGCCCTTATGGTACCTTTGTTGGTGTTTACGATGGTCACGGCGGACCTGAGACATCGCGTTACATTTGTGATAACCTATTCCAGCATCTAAAAAGATTTGCATCTGAGCATAAGTCTATGTCTGTGGAGGTCATTCGGAAGGCGTACCAAGCTACAGAAGAGGGTTTTCTGTCAGTGGTCACTAAACAGTGGCCTATGAATCCTCAAATTGCTGCTGTGGGATCATGTTGTTTGGTTGGTGTGATTTGTGGTGATTCTCTCTACGTTGCTAACCTTGGGGATTCCCGTGTTGTGCTCGGGAGGGTTGTCAGGGCAACTGGGGAGGTTCTGGCAATCCAGCTGTCATCAGAGCATAATGTGAGTATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGACTCAAAAATTGTGGTTTTGAAGCATAACGTATGGCGAGTGAAGGGCCTGATACAGGTCTCAAGATCCATTGGTGATGTGTACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTTCGGGAAACTTTCAAAAGACCAATTTTGAGCTCTGATCCATCAATTTCTGTTCATGAACTTCAAGAGCATGATCAATTTCTCATATTTGCTTCTGATGGTCTTTGGGAACACCTAAGTAATCAGGATGCTGTTGATATAGTTCAAAATCATCCACACAACGGAATTGCTCGGAGGCTCATCAAAGTTGCTCTTCAGGAAGCCGCAAAGAAACGAGAGATGAGGTATTCCGACCTGAAGAAAATAGACCGTGGCGTTCGGCGGCATTTCCACGATGATATCACAGTTGTAGTTGTATTTCTTGACTCCAATCTTGTCAGCCGAGCCAGCTCGGTACGAGGTCCTCCGATATCTGTGAGGGGCGGGGGCGTTCCCCTACCTTCTAGAACCTTGGCTCCATGCGCCGAACTCGGTTCTAGCTGA 1185 0.4734 MLSKFMDFLVACWRRRSSPDRKGSDVSGGRKEGLLWYKDCGQHLFGEFSMAVVQANNLLEDQSQIESGPLSLLDTGPYGTFVGVYDGHGGPETSRYICDNLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKQWPMNPQIAAVGSCCLVGVICGDSLYVANLGDSRVVLGRVVRATGEVLAIQLSSEHNVSIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNKEPLYAKFRLRETFKRPILSSDPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHNGIARRLIKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPISVRGGGVPLPSRTLAPCAELGSS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0886 394 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Amo01g0886 394 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Amo01g0886 394 SMART PP2C_4 37 353 IPR001932 -
Amo01g0886 394 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Amo01g0886 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Amo01g0886 394 CDD PP2Cc 45 355 IPR001932 -
Amo01g0886 394 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Amo01g0886 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Amo01g0886 394 Gene3D - 37 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0886 Amo-Chr1 12063912 12069933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0886 1 383 PP2C-type Phosphatase Gene Family AT3G51370 76.823 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0886 K01102 - gmx:100777920 728.398