Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0869 ATGGCGGTGACACCAGTTCTACTTCACGGGACTTTGGAGGTAACCATTGTTCATGAGGTCCGCCACAATAATCCCAACAAAACTCCCTCTATCTGGGTTCAGTTGATGATATACGTGGTGGGATGGCTGTTGGAGCTATTGGACTGGCTAGTTGAACGCAATAATACTAAACTGGATGCAAAAATTTATCTGGATGGATTCGAAGTGGGAAGCAGGCATATACAAGCCCCCATGGATCGTAGCTGGAGAGAGCATTTTTACTTTCATTGTGCTCAGATGGCGTCAAATATCAAATTCGCTATCAACGATGTTACAAGAGAGGTTTCCGTTCAGGATATCTTGCAAAATGATGGTCAAACATGTGAATGGGTCCTGCAATTGCAAGGGATTGTTGGGCCGGCAGGTTCAAGGACCCGCGTGGTGCTGAAATTTTTGGATGCTAGAAAACACAGCGAAGGGATCGGTTCAGACTTTCATGGAGTTCGTGGCACCCACTACCCACAGAAAAATGGATGCAAGGTTACTCTTTACCAAGATGCTCACATCCCAGCTGATTACGTCGATAAAATGAGCAAGGACGGACTCGTGAATTATGAGCCGAAGCGATGCTGGGAGGACATATTTGATGCAATCAAGAAAGCAGAGAAGTTCGTATACATTGCTGGCTGGTCTCTTTACACTGAAATAACCCTCTTAAGGGATCCAACAAGGAAGACAATGGAAGAGAGACAAACTACACTTGGAGAGCTGCTCAAGAGAAAGGCAGAGAACGGACAGGTCAAAGTTGTATTGCTCATTTCCGATGATCCAACTGCGGTTGCAGGGTATGGAGGAGTGATGGGTATTCGTAGCAAAGAGGCAAAGGCATATTTTAGAGACACTAATGTGCAGTGCGTTTGGTGTTCTCGTCATAATAGTCGCGTGCTTTATAGTCATCACCAGAAGATTGTGGTGGTGGACGATAGTGATATTGGAGGAGGAATAGTGAGTTTCATTGGGGGCATTGATCTCTGCCGTGGAAGATATGATACTCCAGACCATTCACTTTTTAGAACCTTGCAAAAGAATGATGCACATAACAAAGATTTTCATCAAGCCAGTTTTGTTGGTTCTAAAATCGAAAAGGGTGGTCCTAGGGAGCCGTGGCATGACGTGCACTGTCGCCTCGAAGGGCCTGCTGCTTGTTATGTTTATGACACCTTTGTGCAGAGATGTAAGAAGGAAGGTAAAGAGGACATCCTTGTTCCCATGAACCAGCTTCGAGATTTCTTCAATTCCCCATCCCATGGCCACCAAGATAATAATAATAATAATAAGGCGTGGAATGTTCAGGTATTCAGATCTATTGATGACAAAGCTGTTCTCGACTTCCCAAAGGCTCATCATAGAAACATTACCAAAGTTGGGCCCCGGATTTTTAGAGGCAAATATAAAATAATAGATCATAGCATTGAAGATGCCTATATTGAAGCTATTAGGCGAGCAAAGAATTTCATCTATATTGAGAATGAATACTTCATAGGAAGCGATTTCGGTTGGAGTAGCAGACACAAGAAATTTAATGCTTCGAATCTAATCCCAAAGGAGATTTCACTCAAAATTGTTAGCAAGATTAAAGCCAAGGAGAAGTTCGCTGTGTATGTTGTGATTCCAATGTGGCCGGAGGGTGACCCTCATGGTGACGGTTTTGTTAGGGGTGACTTTTCTACAGTCCAGGACATGTTGCTTTTGCAGAGGAAGACAATAGAAATGATGTACAAGGACATTGTTGAAGCACTCAAACAAGAGAAAATTAAGGAAGATCCTCAGAGATATTTGTCATTCTTCTGCCTTGGGAATCGAGAGGTCAGAAAACATGGTGAATATCAACCTCAACGAACGCCACATAGGGATTTGCATTACATGAACGCTCAGACGAGTAGGCGATTCATGATTTATGTACATTCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATCAACCACAGATCAATGCAAGGTGGTAGAGACACTGAGATTGCCATGGGAGCTTATCAACCCTCCTATCTGGCTAGCGGGCAAAATGGTGCAACGGGGCAGATCCACGGTTTCCGCATGTCCTTGTGGTTGGAGCATCTTGGAATATGTGAAAGAACCTTCATCAACCCTGAAAGTAAAGAATGTGTTAGTAGGGTGAACCAACTTGCTGAAAAGTATTGGAAATCGTATTCTGCAGGATCATTTGATACTGACCTTCCAGGCCATCTGCTCCGCTATCCTATTCAAATTTCTAACGATGGAACTGTGCAAGAACTTCCAGGATTCCAGTACTTCCCAGACACCTTTGCCACTATTCTAGGGAAACAAAGTCCTCTCATGCACAACACGTAA 2388 0.4351 MAVTPVLLHGTLEVTIVHEVRHNNPNKTPSIWVQLMIYVVGWLLELLDWLVERNNTKLDAKIYLDGFEVGSRHIQAPMDRSWREHFYFHCAQMASNIKFAINDVTREVSVQDILQNDGQTCEWVLQLQGIVGPAGSRTRVVLKFLDARKHSEGIGSDFHGVRGTHYPQKNGCKVTLYQDAHIPADYVDKMSKDGLVNYEPKRCWEDIFDAIKKAEKFVYIAGWSLYTEITLLRDPTRKTMEERQTTLGELLKRKAENGQVKVVLLISDDPTAVAGYGGVMGIRSKEAKAYFRDTNVQCVWCSRHNSRVLYSHHQKIVVVDDSDIGGGIVSFIGGIDLCRGRYDTPDHSLFRTLQKNDAHNKDFHQASFVGSKIEKGGPREPWHDVHCRLEGPAACYVYDTFVQRCKKEGKEDILVPMNQLRDFFNSPSHGHQDNNNNNKAWNVQVFRSIDDKAVLDFPKAHHRNITKVGPRIFRGKYKIIDHSIEDAYIEAIRRAKNFIYIENEYFIGSDFGWSSRHKKFNASNLIPKEISLKIVSKIKAKEKFAVYVVIPMWPEGDPHGDGFVRGDFSTVQDMLLLQRKTIEMMYKDIVEALKQEKIKEDPQRYLSFFCLGNREVRKHGEYQPQRTPHRDLHYMNAQTSRRFMIYVHSKMMIVDDEYIIIGSANINHRSMQGGRDTEIAMGAYQPSYLASGQNGATGQIHGFRMSLWLEHLGICERTFINPESKECVSRVNQLAEKYWKSYSAGSFDTDLPGHLLRYPIQISNDGTVQELPGFQYFPDTFATILGKQSPLMHNT* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0869 795 Pfam PLD-like domain 489 678 IPR025202 -
Amo01g0869 795 Pfam Phospholipase D C terminal 717 787 IPR024632 -
Amo01g0869 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 308 341 IPR001736 GO:0003824
Amo01g0869 795 SUPERFAMILY Phospholipase D/nuclease 198 416 - -
Amo01g0869 795 SMART pld_4 308 341 IPR001736 GO:0003824
Amo01g0869 795 SMART pld_4 643 670 IPR001736 GO:0003824
Amo01g0869 795 Gene3D Endonuclease Chain A 434 691 - -
Amo01g0869 795 Pfam Phospholipase D Active site motif 310 341 IPR001736 GO:0003824
Amo01g0869 795 Gene3D Endonuclease Chain A 187 433 - -
Amo01g0869 795 PANTHER PHOSPHOLIPASE D ALPHA 3 6 792 - -
Amo01g0869 795 SUPERFAMILY Phospholipase D/nuclease 482 727 - -
Amo01g0869 795 PANTHER PHOSPHOLIPASE D 6 792 IPR015679 -
Amo01g0869 795 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 643 670 IPR001736 GO:0003824
Amo01g0869 795 PIRSF PLD_plant 1 795 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0869 Amo-Chr1 11888470 11893012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0869 7 792 Phospholipase D Gene Family (Wang group) AT1G52570 49.333 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0869 K01115 - csin:114274759 716.457