Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0865 ATGATGTACAAGGACATTATTCAAGCACTCAAGGAAGAGAAAATTGCACAAGATCCTCGGAAATATTTGTCATTCTTCTGTCTTGGCAATCAAGAGGTGAAGAAGGACGGAGAGTATGTGCCTCCACAGAGACCAGAACAAGGTTCTGATTACCAGAAAGCCCAAGAAGAAAGATGCTTCATGATTTATGTGCATTCCAAGATGATGATAGTTGATGATGAGTACATAATCATTGGATCTGCCAACATCAACCAGAGATCAATGGATGGTGGAAGAGACACCAAAATTGCCATGGGAGCTTATCAACCACACCATTTGGCTACCAGCCAGGGTGTTGCAAGAGGCCAAATCCATGGCTTCCGCTTGTCCCTATGGTACGAGCACCTTGGCATGCATGAAGACACCTTCCTCAACCCAGAAAGTGAAGAATGTATTAACAAAGTGAAGCAACTTGGGGACAAGTATTGGGAGTTGTATTCTAACAAAGATTTACTTGGATCTAATAACCTTCCTGTCACTTGCTTCGGTATCTTGTTGACATTTCTACTGATGGAACACTCACAAATCTCTCAGGAGTTGAGTTCTTCCCTGACACTAATGCTCCTATTCTAG 612 0.4265 MMYKDIIQALKEEKIAQDPRKYLSFFCLGNQEVKKDGEYVPPQRPEQGSDYQKAQEERCFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTKIAMGAYQPHHLATSQGVARGQIHGFRLSLWYEHLGMHEDTFLNPESEECINKVKQLGDKYWELYSNKDLLGSNNLPVTCFGILLTFLLMEHSQISQELSSSLTLMLLF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0865 203 PANTHER PHOSPHOLIPASE D 1 164 IPR015679 -
Amo01g0865 203 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 60 87 IPR001736 GO:0003824
Amo01g0865 203 Pfam Phospholipase D Active site motif 61 87 IPR001736 GO:0003824
Amo01g0865 203 Gene3D Endonuclease Chain A 4 107 - -
Amo01g0865 203 SMART pld_4 60 87 IPR001736 GO:0003824
Amo01g0865 203 SUPERFAMILY Phospholipase D/nuclease 57 145 - -
Amo01g0865 203 Pfam Phospholipase D C terminal 133 163 IPR024632 -
Amo01g0865 203 PANTHER PHOSPHOLIPASE D ALPHA 2 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0865 Amo-Chr1 11839916 11840836 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0865 1 171 Phospholipase D Gene Family (Wang group) AT3G15730 67.836 4.20e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0865 K01115 - gmx:100786410 260.766