Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0861 ATGAATTTGAATCTAACGAAGTTCCTAAGACGCTCGGGTGTAGATCAATTCTTCTTTGGGTGTATTTTAGCTAGAAGTGTGGGTGTATATTATATCAGACATGATTGGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTCGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTTTCTACAAGAATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAAGGAACTAAGCATGTCCATTCATCGTACGATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGATGCCGGGGGTCACCGCGAGTTAAATTTTATCGAAAAGGACGTGAGGAATTACATTACCAGGAAAGTGCGGAATGTTTCCGAACAAGAAGATGCAAAGGAATTCGGAAATATTTCTTAA 648 0.4259 MNLNLTKFLRRSGVDQFFFGCILARSVGVYYIRHDWPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHKELSMSIHRTIENNEEAGIRPSKTYQSFVADAGGHRELNFIEKDVRNYITRKVRNVSEQEDAKEFGNIS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0861 215 PANTHER OS03G0843700 PROTEIN 42 165 - -
Amo01g0861 215 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 165 IPR031052 GO:0006355
Amo01g0861 215 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0861 Amo-Chr1 11811611 11812681 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g0861 FAR1 2.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0861 - - adu:110278638 320.857