Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0856 ATGAGGCCATCACTACTCTTGCAAAAGCTTCTTTTTCAATTGTCTCAAGCAATTCTTTGGTGTTGTTCTTCCATTCTCATCATTGCCATCATCATATTATTCCAACATGTTTCTGCTGAAAATCTACCAAACAATGAAACTGTGCCAGCAGTGATTGTGTTTGGAGATTCCATAGTTGATTCTGGCAACAACAATTATATCAGTACTATTGTCAAGTGTGATTTCTCACCATACGGACGAGATTTTGGTGACGGAAATTATCCAACCGGAAGATTCAGCAATGGTTTAGTCCCATCAGATATTATTGTGAAGAAACTTTTACCACCTTACCTTGATCCGAATTTGCAACTTGAAGATCTCCTCACCGGCGTAAGCTTCGCCTCCGGTGGTGCCGGATATGATCCTCTAACATCCAAATTAATGTCTGTGATATCATTAACAGAACAACTAAACATGTTTAAGGAGTACATAAACAAGATTAAGGCAGCAGTTGGAGAAAACAGAACATCAATGATAGTGTCAAAGAGTATATACATAATTTGCATAGGAAGTGATGACATTGCCAACACTTATGTTCAGACACCATTTAGAAAAATTCAGTATGATATTCCATCATACACAGATTTTATGGCCTCTGAAGCCTCAAATTTCTTTCAGGAACTTTATGGATTAGGAGCAAGAAGGATTGGAGTGTTTGGTGTACCGGTTATAGGTTGTGTGCCCTCACAAAGAACAATTAGTGGAGGCATCCTTAGAGCATGTTCATATTCTACAAACCAAGCAGCAATACTTTTTAACTCAAAGCTCTCCAACCAAATGGATGCACTTCAAAAGAAGTTTCCAGATGCTAGATTTGTCTATCTTGATTCCTACAATCCATTCCTTGACATGCTTCAAAACCCTACAAAATATGGTTTTGCTGAGGTAGAGAAAGGATGCTGTGGCACAGGGAACATAGAAGTGAGCATATTGTGCAACCGTTACAGCCTTAACACATGTTCCAACGACTCTGATTACATTTTCTGGGATAGTTATCATCCTACTCAAAAGGCTTATTTTGTGCTTATAGCCAAATCGTCACAACAACCTACATATATGAACTATTCATTTCCTGCTGTCATAGCTTTTGGTGATTCAATCTTGGATACTGGCAACAACAATTACATTCTAACAGCTTTGAGGTCCAATTTTAAACCTTATGGCAGAGATTTCTTTGCAGAAGAATCCACCGGAAGGTTTTGCAATGGCAGAATCCCTTCAGATTTTTATGATTTGGAGATTGAAGATCTCTTAAGTGGGGTGAGCTTTGCCTCTGCTGGTTCAGGATATGATCCTCTCACAGTTGAACTAGCTTCAGTGTTGTCAACAGAGGATCAATTAGACATGTTCAAAGAATACATTGGAAAACTTAAGGGTGCTGTGGGAGAAGAAAGAACAGCTTACATTCTTGAAAAGAGCATAGTTCTCATCAGCATGGGAAGCAATGATATTGCAGGAACATATTTTCTCACACCATATAGGAGAGTCCATTACAATGTCAGACAATATTCAAGAAGGCTTATCAGATTAACAACAAGATTTATATTGGAACTATATCGATTGGGAGCAAGAAGGATTGGAACAGTGAGCTTATCAGCATTAGGATGCATCCCAATGCAGAGGACAGTGAGAGGAGGCATAAAAAGGAATTGTGTGGAGCCAGTAACAAAGGCAGCACAAGTCTACAATACCATGCTCTATCAATCACTTATGGCTCTCAAGAAGACCCTCTCTGGTTCCAGAATTGTATACCTTGATGTCCATAATTCACTCAATATGCTCATTCAACACCCCAATCAATTTGGGTTTGAGAGCGTGGACAGAGCATGCTGTGGCATTGCAAGTATGGAACTTGGCCCATTTTGTAGCACTTTCTCATTGAAAATATGCAAAGATGCATCCAAATATGTGTTCTGGGATAGTTATCACCCTACTGAGAGAACTTACGGCATTCTTACCTCAGATTTGATCAAAAAGACCATTGATCAATTTGTCTAA 2037 0.3903 MRPSLLLQKLLFQLSQAILWCCSSILIIAIIILFQHVSAENLPNNETVPAVIVFGDSIVDSGNNNYISTIVKCDFSPYGRDFGDGNYPTGRFSNGLVPSDIIVKKLLPPYLDPNLQLEDLLTGVSFASGGAGYDPLTSKLMSVISLTEQLNMFKEYINKIKAAVGENRTSMIVSKSIYIICIGSDDIANTYVQTPFRKIQYDIPSYTDFMASEASNFFQELYGLGARRIGVFGVPVIGCVPSQRTISGGILRACSYSTNQAAILFNSKLSNQMDALQKKFPDARFVYLDSYNPFLDMLQNPTKYGFAEVEKGCCGTGNIEVSILCNRYSLNTCSNDSDYIFWDSYHPTQKAYFVLIAKSSQQPTYMNYSFPAVIAFGDSILDTGNNNYILTALRSNFKPYGRDFFAEESTGRFCNGRIPSDFYDLEIEDLLSGVSFASAGSGYDPLTVELASVLSTEDQLDMFKEYIGKLKGAVGEERTAYILEKSIVLISMGSNDIAGTYFLTPYRRVHYNVRQYSRRLIRLTTRFILELYRLGARRIGTVSLSALGCIPMQRTVRGGIKRNCVEPVTKAAQVYNTMLYQSLMALKKTLSGSRIVYLDVHNSLNMLIQHPNQFGFESVDRACCGIASMELGPFCSTFSLKICKDASKYVFWDSYHPTERTYGILTSDLIKKTIDQFV* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0856 678 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 358 - -
Amo01g0856 678 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 367 677 - -
Amo01g0856 678 CDD SGNH_plant_lipase_like 49 358 IPR035669 -
Amo01g0856 678 Pfam GDSL-like Lipase/Acylhydrolase 51 352 IPR001087 GO:0016788
Amo01g0856 678 Pfam GDSL-like Lipase/Acylhydrolase 373 666 IPR001087 GO:0016788
Amo01g0856 678 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 373 384 IPR008265 GO:0006629|GO:0016298
Amo01g0856 678 CDD SGNH_plant_lipase_like 371 672 IPR035669 -
Amo01g0856 678 PANTHER GDSL ESTERASE/LIPASE EXL3 4 358 - -
Amo01g0856 678 PANTHER GDSL ESTERASE/LIPASE EXL3 367 677 - -
Amo01g0856 678 Gene3D SGNH hydrolase 36 362 IPR036514 -
Amo01g0856 678 Gene3D SGNH hydrolase 363 674 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0856 Amo-Chr1 11745332 11754868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0856 366 671 Pollen Coat Proteome AT1G75910 37.003 2.15e-64 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0856 - - ahf:112723705 1288.09