Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0845 ATGGGTTCAATTGGAACCGAAAGCCCAAAAGTTGAGGTTGCCACAGTTGATGTAATTTCAACTAAGGGTCTTATCCAGAATGGCCATGTTTATCTAGATGTTAGGACTGTGGAAGAGTTCCAGAAAGGACATGTGGATGCAGATAAGATTATCAACATTCCATACATGTTTAATACACCACAGGGAAGGGTGAAGAACCTGGAGTTTCTGAAGGAGGTTTCATTTGCTTGTAAGAAAGAAGAACACATCATTGTGGGTTGCCAGAGTGGGGTGAGGTCTCTTTATGCAACTGCTGATCTTCTTGCTGAGGGTTATAAGGATGTGAATAACATGGGAGGAGGTTATTTGGACTGGATAAAGAATGAATTTCCAGTGAAAGCACCAAAAGTGAAAAATGATATCTAA 405 0.4049 MGSIGTESPKVEVATVDVISTKGLIQNGHVYLDVRTVEEFQKGHVDADKIINIPYMFNTPQGRVKNLEFLKEVSFACKKEEHIIVGCQSGVRSLYATADLLAEGYKDVNNMGGGYLDWIKNEFPVKAPKVKNDI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0845 134 Pfam Rhodanese-like domain 27 120 IPR001763 -
Amo01g0845 134 CDD RHOD 24 118 - -
Amo01g0845 134 SMART rhod_4 11 124 IPR001763 -
Amo01g0845 134 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 14 125 IPR036873 -
Amo01g0845 134 Gene3D - 5 127 IPR036873 -
Amo01g0845 134 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 130 - -
Amo01g0845 134 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 130 IPR044684 GO:0003824
Amo01g0845 134 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0845 Amo-Chr1 11661416 11663759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0845 3 125 Sulfurtransferasese or Rhodanese AT5G66170 57.724 6.80e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0845 - K15692 gmx:100792251 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0377 05 4405760 4406984 Amo01g0845 01 11661416 11663759 PCT
Amo05g0326 05 3959410 3961227 Amo01g0845 01 11661416 11663759 PCT
Amo01g0845 01 11661416 11663759 Amo05g0377 05 4405760 4406984 PCT