Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0843 GAGTCGTTAGATAAAAATTCAGTCAACCTTCCATTGGAAAAAGGTGTTTCTAGCAATGTTTGGCGTGCAACACCTACAAATTCTGCTTTTGATGACTCTGCTATTTGTGGCAGAGATGACGAAAGAAAGAATCTTCGAGAGTATTTGCTGTCAGAAGATGTTGTTATTGATGGTGGCAGTAAAATAGGAGTGCTTGCCATTGTTGGCATGGGAGGGCTCGGGAAAACGACCCTGGCTAAACTCTTATACAATGATGCTCAAGTTAAAGAAAAGTTTGATGTGAAAGCATGGGCATCTGTCTCCAAAGATTTTGATGTTGTCAAGTTGGCAAAATCTCTTCTTGAATCTGTCACATCTGTAGCAACAACTTTGGATAACTTCGATACCTTGCGAGCAGAATTGCAAAAGAAGTTGTCGGATAAAAGATTTCTGCTTGTGTTGGATGATATATGGAATGCAGGATATGTTGATTGGACCAATCTGATGCACATTTTAAATGTTGGGCAATTGGGAAGCAAAATCATTGTTACAACACGACATGAAAGAGTTGTGAGTGTTGTAAATGCTACACAGACCTGCCCTCTAAAACCACTGGTGATTGAAGATTGTTGGACTTTAATTTCAAAACATGCATTTGCAACACATAAATGCACTGAGCAGTCCAACCTAGAAGAAACTGGAAGAAAAATTGCCGAAAGGTGTGGTGGCTTGCCATTAGCTGCAGTTGCATTGGGTGGTGTTCTTCGCACAAACTTATCAAATGATTACTGGAATAAAGTGTTAACTAGCAACCTTTGGAATCTGACAAAAGAGGATGTGCAACCAGCTCTTCTATTGAGCTATCATTTCCTTCCCGCTTCTTTGAAACAATGCTTTGCTTATTGTGCAATTTTCCCAAAGAACTCAGAGCTGCACAAAGAGAAGTTACTATGGATGGCACAGGGATTTGTTTATGTGTCCCAAAATGAGAAAAGCATTGAAGAAGTAGGCGGTGAATACTTTGATGAACTAGTGGCAAGGTCATTGTTACGACGTTCTGCCGATGGGGAACACTTTGAAATGCATGACCTCATCAACGATTTGGCAACCATGGTTTCTTCCCCATATTGTAAGAGGCATGACAAGGAAACGCAACTTGGAAATCTAAACAAAATTCGTCATTTATCTTATGAGAAAAGTATGTCTAACCATTTTGACGAACTTGATTCCCTTCATGGATTGAAAGGCTTACGTACACTCACAGCATTACCGTTAGAATTTGGTTACATGATCTTCCGCCATTACCTAGAGAATGAGGTATTGCATGAGTTGTTGGTAGCATTGAAACAGTTGCGGGTGTTATCCCTGTCATCCTACAACAATATCACTGTTTTGCCGAATTCTATTGGCCATATAAAGCATTTGCGATACCTAGATCTATCTTGCAGTGGAATTGAAAGGTTGCCTCCTGCAATATGCAAGCTCTACAATCTACAGACCTTGTTGTTAACTTATTGTAGGGATCTTACTGAGTTGCCTGAGGAGATGGGAAAATTGGTGAATCTACGCCACCTTGCTATTGATAATTGTATAAATCTTACTGAGTTGCCCAAGGAGATGGGAAAATTGGTGAATCTACGCCACCTTGATATTAGTTGGTGTTGTGCTCTTACTGAGTTGCCTAAGGAGATGGGAAAATTGGTGAATCTACGTCGTCTTGATATTGATGGTACCGGATTGCAGGAGATGCCCGTAGAAATAGCCAAACTGGAAAATCTGCAAAGTTTGAGTCGTTTTATTGTCAGCAAACAACAACATGGACTGAAGCTTGCAGAAATGAGAAAATTTCCCCATTTACAAGGTCAACTCCGCATCTCAAATCTAGAAAATGTTTTTGATCCGTCTGATGCTTATCAAGCCAATTTGAAGGAGAAAAACCAAATTGAGGAGTTATCATTGGAATGGAGTGATTCCATCTTGGAAGACTCCCAACAAGTTGTACTTGAACATCTGCAGCCCTCAACTAGTCTGAAGAAACTGAGTCTTAAATGCTACGGTGGATCTACTTTCCCAAGCTGGTTGGGTGATTCCTCATTTGGCAACATAGTGGGTTTGAGGATTGAAGATTGTGATCATTGTTCTTCATTGCCACCTCTTGGACGACTACATAGTCTAAAAGAACTCTTCATTTCAGGTATGAGATCAGTGAAGAGTATTGGGTCTGAATTTTACGGAGGTAATTCCCCTTCTTTCCAACCGTTTCCCTCCTTGGAGACTTTGAGTTTTGAGTTTATGTTAGAGTGGGAGGAATGGAACATGATAGATGGTATAACTAGTGAGTTCCCCCGTCTATCACACTTATCTCTTTCTTTCTGTCCGAAGCTGAAAGGAACTTTACCCAGCAATCTTCCTTGTTTGGTTACACTTGAAGTAATGTATTGTCGTGTACTTGAATCAGAGTTTTCAGGAGAAGTGGATAACAGAAACATAATGAGACCATTGAATCTATTCAATTTTAACTCTCTTCAAGATTTATCTCTCAATACAATTCCTTCCCTGACGTCCTTCCCGAGCAATGGTCTACCCAAAGCGTTAAAGACACTTTCTATCAGAGATTGTGAGAGCCTTGAATTCCCAACTCATGAGTTCCTTCAGAGTTGCAAGGCACTTGAGGATTTGTCCATAATGAGTAGCTGTTGCTCGCTGACGTCATTTCCCTTAGGTTCTCTCCCTGTGCTCAAGCGTCTTCTACTTAGCAAATGTAAAAAATTGAAATCAATTTCAATTTTGGAAGAAGAAGCAGCAAGCCAATCTCTCATGTTTCTTGAACATCTCAGAGTAGATGAGTGTCCTGAACTGGAGTCGATTTCCCTACTCGATTTGTGCACTCCTAACCTGCAAGAGGGTTTGCCTTTCAATTTAACGACACTAATTGTCGGCAATGAAAAAGGGGTTTATTGCAATACAGATATCACCAAGTGGGGCTTGGACCGACTCACTTCTCTTTCATATTTGAGTATTCAAGGTGAGTATCTGGTTAAGAAGCTGATGGAAATACAATTGCCCTTTGGCTTCAGCCATCTCACCTCCCTCAAAACTCTTGAGTTGGTAGCATGTGACAAGCTCAAGTCACTGCCAAAAGAAGGGCTGCCCTCCTCAATTTCAAGTCTAGAAATTCGGAGATGCCCAATGGAAAAAGAAATGGCTGCTGCTGTTGCTGTTGTTGTGGGAGAAGCGTTGCTCTCAGCTGCTGTGGAAGCATTGGTTGGGAAGATCTCCACTGAGATATCGGAGTTCTATCGGAGCAAGAATCTCGATGAATCGCTGCTGGAGAAGCTGAAATTGACGCTGCTAAGCCTTCATGCTTTTCTGAATGATGCTGAGGAGAAGCAGATCAGCAACGCTGCTGTGAAGGCATGGATGGATGAACTCACTCAAGCTCTCTTTGATGCCGATGACTTCATCGATGATATCGCCACCGACGCTCTCCGTCGCAAAGTCGAGGCCAACTATCTTCACCGTCAAACTGTCACGGCTAAGCATTTTGCTCAAAGAGCACACAACCTTCCATTGGAAAAGGGTGTTTCCCGTAGTGTTTGGCGTGCAACACCTACAAATTCTGCTGTGGATGATTCTGCTATTTGTGGGAGGGATGATGAAAAACAGAACCTTAGAGAGTATTTGCTGTCAGAAGATGCTGTTGCTGATGGTGGCTGTAAAATAGGAGTTCTTGCCATTGTTGGCATGGGAGGGCTCGGGAAAACTACCCTCGCTAAACTCTTATACAATGATGCTCAAGTTAGAGAAAAGTTCCATGTGAAAGCATGGGTATCTACCTCGAAAGATTTTGATGTTGTCAAGCTGACAAAATCTCTTCTTGAATCAGTCACGTCTGCAGCAACAAATTTGGATAACTTCGATACGTTGCGAGCTGAATTGCAAAAGAACTTATCTGGTAAAAGATTCTTGCTTAGGTGCGAGGATCAAAAGGCCGTTGAAAATCAAAACAAAATTCGTCATTTATCTTATGATAAAAATATGTTTAACCATTTTGGCGAACTTGATTCCTTTCATGGATTGAAAGGTCTTCGTACACTCCTAGCATTACCATTACCATTTGATAACCGGTATGGGGGCCATTTCCTAGTGAATGGGGTATTGCATGAGTTGTTGGTAGCATTGAAACAGTTGCGGGTGTTATCCCTGTCAAGCTACTGGAATATCACTGTTTTGCCGAATTCTATTGGCGATTTAAAGCACTTGCGACATCTAGATCTATCTTTCACTGGAATTAAAATGTTACCTCCTGCAATATGCAAGCTCTACAATCTACAGACCTTGTTGTTATCTTATTGTGATGCTCTTACTGAGTTGCCTGAGGAGATGGGAAAATTGGTGAATCTACGCCGCCTTGCTATTGATAATTGTATGAATCTTAAAGAGTTGCCCAAGGGGATGGGAAAATTGGTGAATCTACGCCGCCTTGATATTGATGGTACTAATTTGCAGGAGATGCCCTTAGAAATAGCCAAACTAGAAAATCTGCAAAGTCTGAGTCGTTTTATTGTCAGCAAACAACAAAACGGACTGAAGCTTGCAGAATTGAGAAAATTTCCCCTTTTACAAGGAGAACTCTGCATCTCAAAACTAGAAAATGTTATTGATCCGTCTGATGCTTGTCAAGCTAATTTGAAGGAGAAAAAGCAAATTAAAGAGTTATTGTTGAAATGGAGTCATTCCACTTTGGAAGAGTCCCATCAAGTTGTACTTGAACATCTGCAACCCTCAACTAATTTGAAGAAATTGACTGTTAAATGCTATGGTGGAACTAGTTTCCCAAATTGGTTGGGTGATTCCTCGTTTGGCAACATAGTGAGTTTGTGGATTGAAGATTGTCGTCATTGTTCTTCATTGCCACCTCTGGGACGACTACAGAGTCTAAAAGAACTCTTCATTTCGGGTATGAAATCAGTGAAGAGTATTGGGTCTGAATTTTACGGAGGTAATTCCCCTTCATTCCAACCCTTTCCCTCCTTGGAGACTTTGAGTTTTGAGTCGATGGCAGAGTGGGAGGAATGGAACATGATAGATGGTATAACTACTGAGTTTCCCCGTCTATCAAAGCTATCTCTGAGAAGTGTCCGAAACTGA 5130 0.4127 ESLDKNSVNLPLEKGVSSNVWRATPTNSAFDDSAICGRDDERKNLREYLLSEDVVIDGGSKIGVLAIVGMGGLGKTTLAKLLYNDAQVKEKFDVKAWASVSKDFDVVKLAKSLLESVTSVATTLDNFDTLRAELQKKLSDKRFLLVLDDIWNAGYVDWTNLMHILNVGQLGSKIIVTTRHERVVSVVNATQTCPLKPLVIEDCWTLISKHAFATHKCTEQSNLEETGRKIAERCGGLPLAAVALGGVLRTNLSNDYWNKVLTSNLWNLTKEDVQPALLLSYHFLPASLKQCFAYCAIFPKNSELHKEKLLWMAQGFVYVSQNEKSIEEVGGEYFDELVARSLLRRSADGEHFEMHDLINDLATMVSSPYCKRHDKETQLGNLNKIRHLSYEKSMSNHFDELDSLHGLKGLRTLTALPLEFGYMIFRHYLENEVLHELLVALKQLRVLSLSSYNNITVLPNSIGHIKHLRYLDLSCSGIERLPPAICKLYNLQTLLLTYCRDLTELPEEMGKLVNLRHLAIDNCINLTELPKEMGKLVNLRHLDISWCCALTELPKEMGKLVNLRRLDIDGTGLQEMPVEIAKLENLQSLSRFIVSKQQHGLKLAEMRKFPHLQGQLRISNLENVFDPSDAYQANLKEKNQIEELSLEWSDSILEDSQQVVLEHLQPSTSLKKLSLKCYGGSTFPSWLGDSSFGNIVGLRIEDCDHCSSLPPLGRLHSLKELFISGMRSVKSIGSEFYGGNSPSFQPFPSLETLSFEFMLEWEEWNMIDGITSEFPRLSHLSLSFCPKLKGTLPSNLPCLVTLEVMYCRVLESEFSGEVDNRNIMRPLNLFNFNSLQDLSLNTIPSLTSFPSNGLPKALKTLSIRDCESLEFPTHEFLQSCKALEDLSIMSSCCSLTSFPLGSLPVLKRLLLSKCKKLKSISILEEEAASQSLMFLEHLRVDECPELESISLLDLCTPNLQEGLPFNLTTLIVGNEKGVYCNTDITKWGLDRLTSLSYLSIQGEYLVKKLMEIQLPFGFSHLTSLKTLELVACDKLKSLPKEGLPSSISSLEIRRCPMEKEMAAAVAVVVGEALLSAAVEALVGKISTEISEFYRSKNLDESLLEKLKLTLLSLHAFLNDAEEKQISNAAVKAWMDELTQALFDADDFIDDIATDALRRKVEANYLHRQTVTAKHFAQRAHNLPLEKGVSRSVWRATPTNSAVDDSAICGRDDEKQNLREYLLSEDAVADGGCKIGVLAIVGMGGLGKTTLAKLLYNDAQVREKFHVKAWVSTSKDFDVVKLTKSLLESVTSAATNLDNFDTLRAELQKNLSGKRFLLRCEDQKAVENQNKIRHLSYDKNMFNHFGELDSFHGLKGLRTLLALPLPFDNRYGGHFLVNGVLHELLVALKQLRVLSLSSYWNITVLPNSIGDLKHLRHLDLSFTGIKMLPPAICKLYNLQTLLLSYCDALTELPEEMGKLVNLRRLAIDNCMNLKELPKGMGKLVNLRRLDIDGTNLQEMPLEIAKLENLQSLSRFIVSKQQNGLKLAELRKFPLLQGELCISKLENVIDPSDACQANLKEKKQIKELLLKWSHSTLEESHQVVLEHLQPSTNLKKLTVKCYGGTSFPNWLGDSSFGNIVSLWIEDCRHCSSLPPLGRLQSLKELFISGMKSVKSIGSEFYGGNSPSFQPFPSLETLSFESMAEWEEWNMIDGITTEFPRLSKLSLRSVRN* 1710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0843 1709 PANTHER DISEASE RESISTANCE PROTEIN RP 1374 1706 IPR044974 GO:0006952
Amo01g0843 1709 PANTHER DISEASE RESISTANCE PROTEIN RP 26 544 IPR044974 GO:0006952
Amo01g0843 1709 Gene3D - 198 279 IPR042197 -
Amo01g0843 1709 Gene3D Ribonuclease Inhibitor 364 547 IPR032675 -
Amo01g0843 1709 PANTHER DISEASE RESISTANCE PROTEIN RP 526 794 IPR044974 GO:0006952
Amo01g0843 1709 PANTHER DISEASE RESISTANCE PROTEIN RP 1085 1317 IPR044974 GO:0006952
Amo01g0843 1709 SUPERFAMILY RNI-like 423 755 - -
Amo01g0843 1709 Gene3D - 23 193 IPR027417 -
Amo01g0843 1709 Gene3D Ribonuclease Inhibitor 816 1060 IPR032675 -
Amo01g0843 1709 Pfam NB-ARC domain 62 262 IPR002182 GO:0043531
Amo01g0843 1709 Pfam NB-ARC domain 1232 1318 IPR002182 GO:0043531
Amo01g0843 1709 PANTHER OS05G0414200 PROTEIN 526 794 - -
Amo01g0843 1709 PANTHER OS05G0414200 PROTEIN 1374 1706 - -
Amo01g0843 1709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 295 IPR027417 -
Amo01g0843 1709 PRINTS Disease resistance protein signature 137 151 - -
Amo01g0843 1709 PRINTS Disease resistance protein signature 439 455 - -
Amo01g0843 1709 PRINTS Disease resistance protein signature 234 248 - -
Amo01g0843 1709 PRINTS Disease resistance protein signature 64 79 - -
Amo01g0843 1709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1198 1317 IPR027417 -
Amo01g0843 1709 Pfam Rx N-terminal domain 1077 1162 IPR041118 -
Amo01g0843 1709 Gene3D Ribonuclease Inhibitor 1376 1709 IPR032675 -
Amo01g0843 1709 PANTHER OS05G0414200 PROTEIN 1085 1317 - -
Amo01g0843 1709 PANTHER OS05G0414200 PROTEIN 26 544 - -
Amo01g0843 1709 Gene3D - 280 363 IPR036388 -
Amo01g0843 1709 Gene3D - 1076 1186 - -
Amo01g0843 1709 SUPERFAMILY RNI-like 740 1052 - -
Amo01g0843 1709 SMART LRR_typ_2 512 536 IPR003591 -
Amo01g0843 1709 SMART LRR_typ_2 1482 1505 IPR003591 -
Amo01g0843 1709 SMART LRR_typ_2 441 464 IPR003591 -
Amo01g0843 1709 SMART LRR_typ_2 560 583 IPR003591 -
Amo01g0843 1709 SMART LRR_typ_2 465 488 IPR003591 -
Amo01g0843 1709 SMART LRR_typ_2 1411 1434 IPR003591 -
Amo01g0843 1709 CDD AAA 37 181 - -
Amo01g0843 1709 Gene3D Ribonuclease Inhibitor 548 812 IPR032675 -
Amo01g0843 1709 Gene3D - 1194 1358 IPR027417 -
Amo01g0843 1709 SUPERFAMILY L domain-like 1321 1706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0843 Amo-Chr1 11626004 11653638 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0843 62 732 WRKY Transcription Factor Family AT5G45050 23.389 5.90e-16 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0843 - - ahf:112719656 1534.62