Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0837 ATGGAGGAATTTTATGATATTAAAACATTATGCTTATTTGGAATATTTGATGGTCATGGTAGTTCTCATGCTGCAGATGAAACGTATCAAGGGACTGATTCTCAATTTTTGAATTCTGAAAAAGACACTTTCCGGGATGATGGCTCTACTGCTTCAACTGCTGTTTTGGTTGATAACTATCTCTATGTTACTAATGTTGGAGATTCTGGGACTATAATATTGAAGGCTGGTAAAGCAATTGCTCTCTCAGGAGTTGATGAACAGAAGAGGAATTGA 276 0.3623 MEEFYDIKTLCLFGIFDGHGSSHAADETYQGTDSQFLNSEKDTFRDDGSTASTAVLVDNYLYVTNVGDSGTIILKAGKAIALSGVDEQKRN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0837 91 ProSitePatterns PPM-type phosphatase domain signature. 12 20 IPR000222 GO:0043169
Amo01g0837 91 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 26 - -
Amo01g0837 91 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 25 84 - -
Amo01g0837 91 PANTHER ALPHABET, ISOFORM E-RELATED 1 26 - -
Amo01g0837 91 PANTHER ALPHABET, ISOFORM E-RELATED 25 84 - -
Amo01g0837 91 SUPERFAMILY PP2C-like 7 83 IPR036457 -
Amo01g0837 91 Gene3D - 2 85 IPR036457 -
Amo01g0837 91 Pfam Protein phosphatase 2C 25 83 IPR001932 -
Amo01g0837 91 ProSiteProfiles PPM-type phosphatase domain profile. 1 91 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0837 Amo-Chr1 11571088 11571437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0837 1 91 PP2C-type Phosphatase Gene Family AT5G53140 53.659 2.31e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0837 K17506 - gmx:100805795 121.709