Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0821 ATGACACTGCAAAACAACACCCCAACAAGAACAAAGAAGCAACTCATCATTGATGATGATGATGCTAATGAACATTCTCCATTGCTACCAACAAAGAGAGATCATGATTATGATGATGGTAATGGTGATGGTGCATCCTTTGTTGGGTCAGTGTTCAATTTATCAACAACAATCATTGGTGCTGGAATCATGGCCTTACCAGCAGCAATCAAAGTGCTTGGTCTTCTCCCTGGCATTTCATCAATCATCTTCCTTGCATTCCTCACTGACACCTCTCTTGACATACTCCTAAGGTTCAGCAGAGTTGCAAAAGCTTCATCCTATGCTCATGTCATGGGTTCTGCTTTTGGAAGACTTGGAACAATGGTGCTTCAGATATCTGTTTTCATCAATAATCTTGGGATACTTGTTGTCTATATGATTATAATTGGTGATGTGCTTTCTGGAACATCGTCGAGTGGAATTCACCATTTTGGTGTGCTAGAAGGATGGTTTGGTGAATGCTGGTGGACTGGCCGTTATTTCATTCTTCTTGTTACAACCCTTTTCATATTTGCTCCATTGGCATTTGTTAAGAGAATAGATTCATTGAGGTATTCTTCTGCTTTAGCGGTGGCTCTGGCGATCGTGTTTCTAGTCATAACTGCAGGAATCACACTGTTTAAATTGTTTAATGGCAGTATTGCTAGTCCGCGGTTACTTCCAAACGTTACTGATAGTGCATCTCTATGGAATCTCTTCACAGCAGTTCCAGTTCTTGTGACAGCATTTGTGTGCCATTACAATGTTCATACAATAGACAAGGAGCTAGGAGACTCCTCGTTGATACAACCGGTTGTGCGCGCATCACTCTCTCTGAGTTCGAGCATCTATATTCTTACAGCCTTATTCGGATTCCTCCTATTTGGTGAATCAACTCTGGATGATGTGCTAGCCAACTTTGATACTGATCTTGGCATCCCTTACAGCAGTCTCCTTAACGACGTTGTTCGCATTAGCTATGCTCTCCACCTCATGCTTGTTTTCCCGGTGATCTTCTTCTCGTTGCGCTTCAATTTTGACGATCTCATCTTTCCTTCAGCTAGGCCACTGAATTCAGATCAGTGTAGATTTGTCTCGATCACCAGCGGACTTGTTGCTTTAGTGTACATAGCTGCAAACTTTATACCAAGCATATGGGATGCTTTTCAATTCACTGGAGCCACTGCCACTGTTTGCCTTGGGTTTATTTTCCCAGCTGCGATCGCTCTAAGGGATTCCCATGGCATTGCATCAAAGAAGGACAAGATTTTATCTGTTATAATGATCGCTCTTGCCATATTCTCAAACATCATAGCGATATACAGTAACGCCAATTCCATGTTCAGGAAGGAAGTTGATGATCTTCATTGA 1392 0.421 MTLQNNTPTRTKKQLIIDDDDANEHSPLLPTKRDHDYDDGNGDGASFVGSVFNLSTTIIGAGIMALPAAIKVLGLLPGISSIIFLAFLTDTSLDILLRFSRVAKASSYAHVMGSAFGRLGTMVLQISVFINNLGILVVYMIIIGDVLSGTSSSGIHHFGVLEGWFGECWWTGRYFILLVTTLFIFAPLAFVKRIDSLRYSSALAVALAIVFLVITAGITLFKLFNGSIASPRLLPNVTDSASLWNLFTAVPVLVTAFVCHYNVHTIDKELGDSSLIQPVVRASLSLSSSIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSLLNDVVRISYALHLMLVFPVIFFSLRFNFDDLIFPSARPLNSDQCRFVSITSGLVALVYIAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDSHGIASKKDKILSVIMIALAIFSNIIAIYSNANSMFRKEVDDLH* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0821 463 PANTHER AMINO ACID TRANSPORTER AVT6A 14 459 - -
Amo01g0821 463 Pfam Transmembrane amino acid transporter protein 45 451 IPR013057 -
Amo01g0821 463 PANTHER AMINO ACID TRANSPORTER 14 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0821 Amo-Chr1 11325375 11328668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0821 26 458 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.048 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0821 K14207 - gmx:100778699 692.189