Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0783 ATGATTTGCTCTTTGAGACAACCTAGTATAGGGATCACTGGTTCTGATGTTGTGTTGAGGCAAAAACACGCAACCCCATTTCAAGCATGTTCATTTTTACCTCCTTTGTCATTGAAGAAAAAACCCCAGAAACATGTTGTTTCGGTGAACAAACCACTGCACGTTGCTTCTGTTAGTGTTGGGAATTTTGGGTCAGTGAAGGAATTTGAGGGTTTTGGAAAGAGAGAGAGTGATGATTTGGTGAAGTGTGGTGCATATGAGGCAGATAGATCAGAGATTGAAGCAGCTGGTCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTTGTGTTCAATATATATAACAAGAAGGTGTTGAATGCATACCCTTACCCTTGGCTCACATCAACACTTTCACTTGCTTGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACAGGGATTGCTGAATCCCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTACCTGTTGCTGTTGCACACACAATAGGACATGTCGCGGCGACTGTTAGTATGTCGAAAGTTGCAGTGTCTTTTACACATATCATCAAGAGTGGTGAACCTGCTTTTAGTGTCTTGGTTTCCAGATTTCTCCTTGGTGAGACCTTTCCCGTGCCGGTCTATCTATCTTTGATTCCAATTATTGGTGGATGTGCACTTGCCGCTGTTACCGAGCTCAATTTCAATATGACTGGTTTCATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGTAATATCTTTTCGAAGAAGGGCATGAAAGGAAAGTCTGTCAGTGGAATGAATTACTACGCATGCTTATCTATTTTATCCCTTGCACTTCTCACACCATTCGCAATAGCCGTCGAAGGGCCGCAGATGTGGGCAGCTGGATGGCAAATAGCACTCTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCATCTGTACAACCAAGTGTCATACATGTCTTTGGATGAGATCTCGCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATTTCAGTCATAGTTTCTTCCATCATTATCTTCCATACACCAGTTCAACCTGTCAATGCTCTTGGAGCTGCGATAGCTGTCCTCGGAACCTTCTTATATTCACAGGTATTTTTATCTGTTATTCTTTTGTTGTAA 1215 0.4263 MICSLRQPSIGITGSDVVLRQKHATPFQACSFLPPLSLKKKPQKHVVSVNKPLHVASVSVGNFGSVKEFEGFGKRESDDLVKCGAYEADRSEIEAAGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAESPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQIALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQVFLSVILLL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0783 404 PANTHER SOLUTE CARRIER FAMILY 35 34 396 - -
Amo01g0783 404 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Amo01g0783 404 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 34 396 - -
Amo01g0783 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 241 - -
Amo01g0783 404 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0783 Amo-Chr1 10888764 10891483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0783 45 396 Antiporters AT1G61800 81.742 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0783 K15283 - gmx:100801832 648.662