Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0774 ATGGTTGATTCAACGTCAGATTCTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTGATGACCAGTTTGTTCCGAAAGTTGGAATGACTTTTACCACCCTTGAAGATGTTGGAAAATTTTACAGGAACTACGCCAAGGTTGCAGGTTTTTCTATAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGAAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACGAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATATACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTAGATCATTCACACTCCTGCTGTACAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGCTGCCGGGGGTCACCGC 546 0.4286 MVDSTSDSQLNQGEVDYEFESNEVPEPLSVVDDQFVPKVGMTFTTLEDVGKFYRNYAKVAGFSIRVRSTNRKGNEIKNQLITCSREEKWKSKISPTEKTNPTAGLNCPARIYIYTLKDVGAWIISKVVLDHSHSCCTSKAEMLKQHRELSMSIRRTIENNEEAGIRPSKTYQSFVAAAGGHR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0774 182 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo01g0774 182 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0774 Amo-Chr1 10781617 10782614 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g0774 FAR1 9.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0774 - - adu:110280446 334.339