Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0768 ATGGGAGACGTGGCGAAGGACCTCACGGCAGGGACGGTGGGAGGGGCGGCGCAGCTAATATGCGGCCACCCCTTCGACACCATAAAGGTGAAGCTGCAGAGCCAGCCTACACCAGTACCCGGTCAGTCTCCAAAGTATTCAGGTGCAATTGATGCTGTGAAGAAGACACTAGCAGCTGAAGGTCCAAGAGGCTTGTACAAAGGGATGGGGGCCCCACTTGCAACCGTTGCAGCCTTCAATGCGGTGCTGTTTACGGTTAGAGGACAGATGGAAGCATTGGTCAGGACCCAACCTGGTGCTCCCCTCTCAGTTAGCCAGCAGTTTGTTTGCGGCGCCGGCGCCGGCGTTGCTGTTTCCTTCCTTGCTTGCCCCACTGAACTTGTCAAATGCAGGCTGCAAGCACAAAGCGCACTTGCTGGGACCGGAACAGCGGCGGTGGCTGCCGTGAAGTACGGAGGACCAATGGACGTGGCGAGGCAAGTTCTAAGATCAGAAGGCGGCATGAGAGGCCTTTTCAAAGGCTTGATTCCGACCATGGGCCGCGAGATACCGGGAAACGCCATAATGTTTGGTGTCTACGAAGCAATCAAGCAAATGCTTGCAGGGGGCCCTGACACTTCCGGACTAGGCAGAGGATCTCTGATTCTAGCCGGCGGCGTGGCYGGAGCCTCCTTTTGGTTCWTGGTGTATCCAACCGACGTTGTTAAGAGTGTGATCCAAGTTGATGATTACAAGAACCCAAAGTTTTCTGGCTCCTTTGATGCTTTTAGAAAGATTCAAGCTTCSGARGGTTTAAAAGGCCTTTATAAGGGTTTCGGSCCGGCCATGGCGCGAAGCGTTCCGGCCAACGCCGCCTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 897 0.5463 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPVPGQSPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALVRTQPGAPLSVSQQFVCGAGAGVAVSFLACPTELVKCRLQAQSALAGTGTAAVAAVKYGGPMDVARQVLRSEGGMRGLFKGLIPTMGREIPGNAIMFGVYEAIKQMLAGGPDTSGLGRGSLILAGGVAGASFWFXVYPTDVVKSVIQVDDYKNPKFSGSFDAFRKIQASEGLKGLYKGFGPAMARSVPANAACFLAYEMTRSALG* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0768 298 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 298 - -
Amo01g0768 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 296 IPR018108 -
Amo01g0768 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 199 IPR018108 -
Amo01g0768 298 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Amo01g0768 298 Pfam Mitochondrial carrier protein 102 201 IPR018108 -
Amo01g0768 298 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Amo01g0768 298 Pfam Mitochondrial carrier protein 215 297 IPR018108 -
Amo01g0768 298 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 298 - -
Amo01g0768 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Amo01g0768 298 SUPERFAMILY Mitochondrial carrier 3 291 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0768 Amo-Chr1 10678240 10680113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0768 22 297 Antiporters AT1G79900 32.979 1.30e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0768 K15109 - ini:109158481 521.161