Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0721 ATGGTAAGTGTAGCTTCAGCTGTAACTGGATTAATCTGTTATGCTCTCAGCTCTTCCTTCAACCATCTCTTGGGCAACTGGAAACCATGGAAGATCATTTTCTACACTCTCTTCAGTTCCATCACTTTCCTTGTAGCCGTTCTTGCAAAGGATTGGAGAAAATCGTCAACTCTTAGATTCATAGCAAGAAAGTGGCAACGCTTTAGAATCCTTCGGTTCAGATCTCTGACTACGTTCTTGGTTATGCTCTCCACCACCGTCTTCTCCTTCTTCTCCGATAGAGCCAAACCCGTCGTAAAACCAGATGCATACAGTGTGGTTTCCTCTGTTGCATTTTCCACCATGTCACTTAGCTTATCAAGGAGTGTCCCCTTTGTGTTCGAAGAACTCATGTACTTCTCCATGGGAATCTTTATAGCGCAGATGATGAAGATAAAGTTGCTGTTGGGATTCTTTGTTGGAATACTCGTTAGCTTTTGCTTTGTGATTCTACATTCTCTTGTAGATGCTCATGATCCAACTGAACTTCTAGGAATCCAAGATCAACATCCTGAAGTGGCCATTGATATAGCTTTATTGCAAGGCCATGGTAAAAACGACGCAATGACTAACACTGCTGCTGCTCCTCCTTCAACAGTTCAACAACTACCGGCCAGCAATGAGGATGAAGGTTCTCCCGGTCCGTTGAACATCATGGCCACTGAAAATGGCGTCATTGATCGGCTCAAGCGGTGGAGGCAAGCCGCGCTTGTGTTAATTGCTTCTTGCAGATTTCGTTACATGGTAGACTACTTAAAGAAAGAAGAAGAAAGGGAACAAGAAATGAGAAGGATTCGAAATCATGCAGAAGCAATTAGGGAAGCAGGTCAAGAGAGTGAAACTGTGCAACCTTTTCTGACCTCATCTGATGATGATGATGACGAAGAAGAAGAAGAAGAAAAAGAAGAAGCGCAGGAGGAGGAAGAAGCAGCAGCGGCAGAAGAGATACCTTTTCGATCCTGTGTTGCCGGTGAAGATTATTGCACAAGGATCCTTTAG 1038 0.4393 MVSVASAVTGLICYALSSSFNHLLGNWKPWKIIFYTLFSSITFLVAVLAKDWRKSSTLRFIARKWQRFRILRFRSLTTFLVMLSTTVFSFFSDRAKPVVKPDAYSVVSSVAFSTMSLSLSRSVPFVFEELMYFSMGIFIAQMMKIKLLLGFFVGILVSFCFVILHSLVDAHDPTELLGIQDQHPEVAIDIALLQGHGKNDAMTNTAAAPPSTVQQLPASNEDEGSPGPLNIMATENGVIDRLKRWRQAALVLIASCRFRYMVDYLKKEEEREQEMRRIRNHAEAIREAGQESETVQPFLTSSDDDDDEEEEEEKEEAQEEEEAAAAEEIPFRSCVAGEDYCTRIL* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0721 345 Gene3D - 239 290 - -
Amo01g0721 345 MobiDBLite consensus disorder prediction 286 331 - -
Amo01g0721 345 MobiDBLite consensus disorder prediction 300 324 - -
Amo01g0721 345 MobiDBLite consensus disorder prediction 201 229 - -
Amo01g0721 345 PANTHER PROTEIN, PUTATIVE-RELATED 1 243 - -
Amo01g0721 345 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 243 IPR004140 GO:0000145|GO:0006887
Amo01g0721 345 Coils Coil 271 291 - -
Amo01g0721 345 Coils Coil 307 329 - -
Amo01g0721 345 MobiDBLite consensus disorder prediction 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0721 Amo-Chr1 10206604 10207641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0721 228 288 Primary Pumps ATPases AT4G29900 57.377 1.24e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0721 - - mtr:MTR_5g073960 150.599