Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0719 ATGGTGCGCTTGAACAAGCAAGAAAGGTTGTGGAGATTGGTAACCGTTGCTTCAGCTCTAATTGGATTAATCTGTTATGCTCTCAGCTCCTCCTTCAATCATCTCTTCGGAAACTGGAAACCATGGAAGATCATTTTCTACGCTCTCTTCAGTTCCATCACTTTCCTCGTCGCTCTTCTTGCAAAGGATTGGAAACACTCAAGAATTCTTAGATTCTTAGCACGAAAGTGGCAGCGCTTGAGAATTCTTCGGTTCAGATCTGTGACTACGTTCTTGGTTATGCTATCCACCACCGTCTTCTCCTTCTTCTCCGATAGAGCCACCGCCATGGTTGCAAAACCAGATGCATATAGTGTGGTTTCGTCCATTGCTTTCTCCACCATGTCGCTTAGCTGGAATGTCCCCTTTGTGTTCGAAGAACTCATGTACTTCTTCATTGGAATTTTCATAGCTCAAATGATGAAGATTAAGTTGCTGTTGGGATTTTCAGTTGGAACAGTTATTAGCTTTTGCTTTGTGATTCTCCATTCTCATGTAGATGCTCGTGATCCAATAGAACGTGTTGGGATCCAAGATCAGCATCCTCAAGTGGCCATTGATCTAGAAAACCACGCAATCACTAACACTGCTGCTGCTCCTTCAACGGTTCAACAACGACCGGTGGCGACCGATGAGGATGAAGGTTCTCCATTCGACATCACAACCACCAAAAATGCCTCGATTGATCGGCTCAAGCAGTGGAGGCAAGCGGCACTTGTGCTAAATGCTTCGCGCAGATTTGCTTACACCTTGGACTTGAAGAAAGAAGAGGAAAGGGAACAAGTAATGAGAAAAGTTCGAAATCATGCACAAGCAATTAGGAATGCGTTTCGTTTCAGAGCAGCCAGATTAAACTACATCACATACATGGCAGATGTAGGTAGTTGTAGGTGCTTATTCTGA 942 0.4427 MVRLNKQERLWRLVTVASALIGLICYALSSSFNHLFGNWKPWKIIFYALFSSITFLVALLAKDWKHSRILRFLARKWQRLRILRFRSVTTFLVMLSTTVFSFFSDRATAMVAKPDAYSVVSSIAFSTMSLSWNVPFVFEELMYFFIGIFIAQMMKIKLLLGFSVGTVISFCFVILHSHVDARDPIERVGIQDQHPQVAIDLENHAITNTAAAPSTVQQRPVATDEDEGSPFDITTTKNASIDRLKQWRQAALVLNASRRFAYTLDLKKEEEREQVMRKVRNHAQAIRNAFRFRAARLNYITYMADVGSCRCLF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0719 313 Pfam Ca2+-ATPase N terminal autoinhibitory domain 229 271 IPR024750 GO:0005516
Amo01g0719 313 PANTHER - 223 295 IPR000528 GO:0006869|GO:0008289
Amo01g0719 313 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 223 295 - -
Amo01g0719 313 Gene3D - 239 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0719 Amo-Chr1 10184770 10186053 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0719 225 295 Primary Pumps ATPases AT4G29900 69.014 6.84e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0719 - - mtr:MTR_5g073960 151.754