Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0715 ATGACGATGACAATTGTACCCTCCCTTCACTTCTTGCTCCCTCAGAACTCAAAACCCTTCCAAATCCCTAATTTTATCCTGAAAACCCACTACGCCCCTTTTAATTTCAGACCCCAATTTTCCCGGGAAACAAACACCTCTCCTTCCTCCACCGACCGTGGCCTCATTTTCCAGGAGAAAGTTCAGTACCTCGAGAATCTCAAAGTGAACCCACAGAAAGCCTTCCAAGTAAACCCTAACCTCCGATCCACACCACTTTCCACCGTCAAATCCGTCGAGCAATGCCTCTCTTCCATGGGAATCCACCGCTCCGCCATGGGAAGAATCCTCGACATGCTCCCGGAGCTTCTCAACCGAGACCCCGCCACGGACCTCTATCCGATCCTCGATTTCCTCCTCAACGACGTCGGAATCCCTTACCCCGACGTTCACAAATCGATCTCGCGGTGCCCTAGGCTCTTGATCTGCAGCGTGGAGGAGCAATTGAAGCCAACCCTAAAATTCCTGATGAAATTAGGGTTCACCGGTTCGAATTCTCTCACGTGCCAGAACACTGTGCTACTTGTTTCGAGCGTGGAGGGAACGCTCGTTCCGAAGATCGAGTTCTTGAAAAGCTTGGGGCTTTCAGAATCGGAGGTTAATTGCATGGTTGTGAGGTCCCCTGCTTTGTTAACCTACAGTGTAGAGAAGAATTTGAAGCCTAAAGTTGAGTACTTTTTGAATGAGATGAATGGAAACGTTTCGGAGTTGAATCGGTTTCCACAGTATTTTTCATTTAGCTTGGAAGGGAGGATTAAGCCAAGGCATAAGGTGTTGGTTGAGAATAGGGTGAAACTACCTTTACATCTTATGTTGAAGGGTGATGATGGTGTTTTCTATGAGACACTGATTAATACCCGGTTAAGAAAGCTTGATGGAAGGTAG 924 0.4762 MTMTIVPSLHFLLPQNSKPFQIPNFILKTHYAPFNFRPQFSRETNTSPSSTDRGLIFQEKVQYLENLKVNPQKAFQVNPNLRSTPLSTVKSVEQCLSSMGIHRSAMGRILDMLPELLNRDPATDLYPILDFLLNDVGIPYPDVHKSISRCPRLLICSVEEQLKPTLKFLMKLGFTGSNSLTCQNTVLLVSSVEGTLVPKIEFLKSLGLSESEVNCMVVRSPALLTYSVEKNLKPKVEYFLNEMNGNVSELNRFPQYFSFSLEGRIKPRHKVLVENRVKLPLHLMLKGDDGVFYETLINTRLRKLDGR* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0715 307 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 40 305 - -
Amo01g0715 307 Pfam mTERF 133 292 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 Gene3D Transcription termination factor 3, mitochondrial 59 305 IPR038538 -
Amo01g0715 307 PANTHER CGI-12 PROTEIN-RELATED 40 305 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Amo01g0715 307 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0715 Amo-Chr1 10162483 10165479 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo01g0715 mTERF 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0715 K15032 - vvi:100247222 342.813