Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0697 ATGCTACAACTCAAGATAGTGACCATAACCGCGATCTGGTGGTGGTGCACATGGCATGATGATCTTCACGGTGCAGTTGTTGTTGTTGCAGATCCACAAACAAATCTAATAAACAAAGGGTGCAGTTCATACTCGCTAAACGGAACAGACTTGAAGAATTTACATGCCAATGTGAACGGAACTGTTTCAACGATGAGGGGAGAGATAACGGGAAGTGGAAAGTATTTTGGAACATCACAAGAAACAAGGGGAGAGGTAGCAACTTATGCTCTCTTTCAGTGCAGAGATTACCTCTCTCAGAGCGATTGCGTCGCTTGCTTCGACGCCGCCGCCGTGCAGAACCGCAACTGTTCCGATGGTAGTAATGGCGCCAGAGTCACCTTTGACGGATGTTTTCTAAGATATGACAGTGATATGTTCTACGACAAGACCACAGAACCTGGGAACGATGGTGTATTATGTGGGAGCATGCCAACATCGGAAACAGCTACTACTTTTGGTGCAACTGTAACTCAGGCTCTGAAGAATCTCCAATTAGCAACACCAAGAATCAAAGGCTTCTTTGCTGCCACTAAAACACTAGTAGCTAGTGGCGGCGGTTCGGTGTATGCTGTCGCGCAATGTGTTGAAACCGCCACTGAAAGCTCTTGCTTGGATTGCTTGACTTTTGGATTTGTTAACTTGAAGAGTAATTGCATTCCCAACATTGATGGTAGGGCTTATAATGCAGGGTGCTTTATGAGATATTCAAATTTACCCTTCTTTTCTGATAACCAAACCATTGACATCACTCCCTATTTAAAACAAGGAGGTTCAAGCAATAAATGGGGCATTATTGGTGGTGTTGGGGGAGGCATTGCTCTTTTTGTGATCATCTCCATTGCATTATTTGTCTGGTATAAACGATCCAACAACAAAAAGGAAGAGGTTCATAGAGGTGATATATTGGGGGCAACTGAATTGAAAGGTCCAATTAATTACAGCTATAATGATTTGAAAGCTGCAACAGAAAATTTCAGTGAAAATAATAAACTTGGAGAAGGAGGCTTTGGCGATGTATACAAGGGAATTCTGGAAAATGGAAAAGTTGTGGCAGTCAAGAAATTGATTCTAAGCCAATCCAAGAAGATGAAGGATGATTTTGAAACTGAAGTAAAACTTATAAGCAATGTGCATCATCGAAACCTTCTTAGACTTCTTGGATGTTGCAATAAAGGCCAAGAGAGAATCCTTGTTTATGAGTATATGGCAAATAAGAGCCTTGATAAATTCTTATTTGGTGACAAAAAAGGTTTCCTTAATTGGAGGCAACGTTTCGATATAATTATAGGTACAGCTAGGGGCTTGACATACTTACACGAAGAATTTCATGTTTCTATTATACATCGAGATATAAAAACTAGTAATATTCTTTTGGACGATGAATTTCAACCCAAAATTGCTGATTTCGGATTAGCCAGACTTTTACCTAGAGATCAATCTCATCTTAGCACAAGATTTGCTGGAACAATGGGATACACTGCACCTGAATATGCTATTCATGGTCAATTATCAGAAAAAACCGATGTTTATAGCTATGGAATTGTGGTTCTAGAAATTATAAGTGGTAAAAAATGTACCGAAGTGAAGATTGGTATTGACAATGGCCAAGAATACCTTCTTCAACAAGCATGGAAACTATATGAACAAGGCAGGCACATTGAGTTAGTGGATGAAAGCATAAACCCTAATGAGTATGATAAAGAAGAAGTAAAGAAAATAATAGAAATTGCTTTGTTGTGCACTCAAGCATCAGCCACAATGAGACCAGCAATGTCTAAAGTAGTAATCTTACTTAGTAGCAATAATAAGGGCTTATTTGAGAATATTCAACCTTCAATGCCTACTTTTATTGAGTCAACTTTAAAGGCCCCGGAAGATGATATCTTTGCCACAAATAATAATTCCTCTACACCAACTAATTCTACAGTAGTGGCCATAACCCTAATATGGTGGTGGTGGACATGGCATCTTCACGGTGCAGTTGTTGTTGCAGATCCTCAAGTGAATCTAATAAACCAAGGGTGCAGTTCATACAACGAAACCAACTTGAGAAGCTTCTTTGCCAACATCAATGGAACGTTTTCGGAGCTTAGAAGTGATATAGTGAATCAAAGCAAGCACTTTGGAACTGCACAAGAAGCGAGGGGAGAGGTTATCACATACACAATGTTTCAGTGCAGAAACTATCTTTCCCAAAGGGATTGTCTTAGTTGCTTCAACAACGCTACCATTCAAATTCGGAATTGTTCAAATGGTAATGGTGCCAGAGTCATCTATGATGGTTGCTTCCTCAGGTATGAGAGCAATATCTTCTTCAGCCAAACAACTGAACCTGGGAATGGTGTAAAATGTGGGAACAAAACAGGAAAAGGAGGCAATGATTTTGGTTCAGCTGGAAAAGAAGCTCTAATGAATCTCCAAACAGCAACACCAAAAATCAAAGGATTTTATGCTGCCACAAAGACACAATTGCCTAATAATAATAATGGTGGTGCAATCTATGCTGTTGCACAGTGTGTTGAAACTGCCACTCAAAGTGATTGTTTGGCATGCATGAATGTTGGATACAACAATTTGCAAACATGTCTTCCTAATTCTGATGGTAGGGCTTATGATGCTGGTTGTTTTATGAGATATTCACAGACTCCTTTTTTTGCTGATAATCAAACCATTGATATCACTCCATACTTGACACAAGGAGGTTCAAGCAAGAAGTGGGCCATTATAGGTGGTGTTGGTGGAGGTGTAGTTCTTGTTGTGATCCTTCTTGCATTATTTGCATGGTATAGACATTCCAAAAAACCCAAAAGGGTTCCTAGAGGGGATATATTGGGAGCAACCGAGTTGAAAGGTCCAGTTAATTACAAGTATAATGATTTGAAAGCTGCAACAAAAAATTTCAGTGAAGAAAATAAATTAGGAGAAGGGGGTTTTGGTAATGTGTACAAGGGTACTCTTAAAAATGGGAAAGTTGTTGCAGTGAAGAAATTGATTTTGGGGCAAACTGACAAAATGGAAGATCATTTTGAGAGTGAAGTAAAGCTGATTAGTAATGTGCACCATAGGAATCTGGTGAGGCTTCTTGGTTGTTGTAGCAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAATAGTAGCCTTGACAGATTCTTATTTGGTAACAAGAAAGGCTCCCTGAATTGGAGACAACGTTGTGACATAATTTTAGGGACAGCAAGGGGATTGGCCTATCTTCATGAGGAATTCCATGTTTCTATTATTCACAGAGATATAAAGAGTGGAAATATTCTATTGGATGATGATCTTCAACCTAAAATTGCTGATTTTGGTTTGGCTAGACTTCTTCCAGGGGATCAATCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATACAGCACCTGAATATGCAATTCATGGCCAATTATCAGAAAAAGCAGACACTTATAGTTATGGCATTGTAGTCCTAGAAATTATAAGTGGTCAAAAAAGTACTGAAATGAAGGCATGGAAACTGCATGAGGAAGGAATGCACATGGAGTTAGTGGACAAAAGCATAGAAGCCAATGAATATGAAACAGGCGAAGTGAAGAAAATAATGGAAATTGCATTGATGTGCACTCAAGCATCAGCATCAATGAGGCCAACAATGTCTGAAGTAGTTGTGTTATTAAAAAGCAAAGGCTTATTTGAGAATATGCAACCTTCAATGCCTGTGTTTGTTGAGTCAAATATGAAAGTCAGAGGAGATATTTCTGCTTCAACCGCTGGTTCCTCTACAACTACTTCCAATGCTACTATCTCCACTTCTATATTTCGGTCTCTATCTCTAAAAATTTTAGTCCCCTGTGTCCTTACTTTTTGGAGGTACTGA 3924 0.3914 MLQLKIVTITAIWWWCTWHDDLHGAVVVVADPQTNLINKGCSSYSLNGTDLKNLHANVNGTVSTMRGEITGSGKYFGTSQETRGEVATYALFQCRDYLSQSDCVACFDAAAVQNRNCSDGSNGARVTFDGCFLRYDSDMFYDKTTEPGNDGVLCGSMPTSETATTFGATVTQALKNLQLATPRIKGFFAATKTLVASGGGSVYAVAQCVETATESSCLDCLTFGFVNLKSNCIPNIDGRAYNAGCFMRYSNLPFFSDNQTIDITPYLKQGGSSNKWGIIGGVGGGIALFVIISIALFVWYKRSNNKKEEVHRGDILGATELKGPINYSYNDLKAATENFSENNKLGEGGFGDVYKGILENGKVVAVKKLILSQSKKMKDDFETEVKLISNVHHRNLLRLLGCCNKGQERILVYEYMANKSLDKFLFGDKKGFLNWRQRFDIIIGTARGLTYLHEEFHVSIIHRDIKTSNILLDDEFQPKIADFGLARLLPRDQSHLSTRFAGTMGYTAPEYAIHGQLSEKTDVYSYGIVVLEIISGKKCTEVKIGIDNGQEYLLQQAWKLYEQGRHIELVDESINPNEYDKEEVKKIIEIALLCTQASATMRPAMSKVVILLSSNNKGLFENIQPSMPTFIESTLKAPEDDIFATNNNSSTPTNSTVVAITLIWWWWTWHLHGAVVVADPQVNLINQGCSSYNETNLRSFFANINGTFSELRSDIVNQSKHFGTAQEARGEVITYTMFQCRNYLSQRDCLSCFNNATIQIRNCSNGNGARVIYDGCFLRYESNIFFSQTTEPGNGVKCGNKTGKGGNDFGSAGKEALMNLQTATPKIKGFYAATKTQLPNNNNGGAIYAVAQCVETATQSDCLACMNVGYNNLQTCLPNSDGRAYDAGCFMRYSQTPFFADNQTIDITPYLTQGGSSKKWAIIGGVGGGVVLVVILLALFAWYRHSKKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSEENKLGEGGFGNVYKGTLKNGKVVAVKKLILGQTDKMEDHFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGNKKGSLNWRQRCDIILGTARGLAYLHEEFHVSIIHRDIKSGNILLDDDLQPKIADFGLARLLPGDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGIVVLEIISGQKSTEMKAWKLHEEGMHMELVDKSIEANEYETGEVKKIMEIALMCTQASASMRPTMSEVVVLLKSKGLFENMQPSMPVFVESNMKVRGDISASTAGSSTTTSNATISTSIFRSLSLKILVPCVLTFWRY* 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0697 1307 CDD STKc_IRAK 987 1242 - -
Amo01g0697 1307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1102 1114 IPR008271 GO:0004672|GO:0006468
Amo01g0697 1307 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 674 1285 - -
Amo01g0697 1307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Amo01g0697 1307 Gene3D Phosphorylase Kinase; domain 1 954 1057 - -
Amo01g0697 1307 Pfam Protein tyrosine and serine/threonine kinase 984 1239 IPR001245 GO:0004672|GO:0006468
Amo01g0697 1307 Pfam Protein kinase domain 340 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0697 1307 ProSiteProfiles Gnk2-homologous domain profile. 682 785 IPR002902 -
Amo01g0697 1307 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 25 632 - -
Amo01g0697 1307 SMART serkin_6 981 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0697 1307 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0697 1307 ProSitePatterns Protein kinases ATP-binding region signature. 987 1010 IPR017441 GO:0005524
Amo01g0697 1307 Pfam Salt stress response/antifungal 159 251 IPR002902 -
Amo01g0697 1307 Pfam Salt stress response/antifungal 689 782 IPR002902 -
Amo01g0697 1307 Pfam Salt stress response/antifungal 804 895 IPR002902 -
Amo01g0697 1307 Pfam Salt stress response/antifungal 51 137 IPR002902 -
Amo01g0697 1307 CDD STKc_IRAK 345 609 - -
Amo01g0697 1307 ProSiteProfiles Protein kinase domain profile. 981 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0697 1307 Gene3D - 795 898 IPR038408 -
Amo01g0697 1307 Gene3D - 33 140 IPR038408 -
Amo01g0697 1307 Gene3D - 681 785 IPR038408 -
Amo01g0697 1307 Gene3D - 152 254 IPR038408 -
Amo01g0697 1307 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Amo01g0697 1307 ProSiteProfiles Gnk2-homologous domain profile. 148 254 IPR002902 -
Amo01g0697 1307 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Amo01g0697 1307 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 632 - -
Amo01g0697 1307 SUPERFAMILY Protein kinase-like (PK-like) 969 1270 IPR011009 -
Amo01g0697 1307 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
Amo01g0697 1307 Gene3D Transferase(Phosphotransferase) domain 1 1058 1252 - -
Amo01g0697 1307 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Amo01g0697 1307 ProSiteProfiles Gnk2-homologous domain profile. 791 898 IPR002902 -
Amo01g0697 1307 ProSiteProfiles Protein kinase domain profile. 339 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0697 1307 SUPERFAMILY Protein kinase-like (PK-like) 322 612 IPR011009 -
Amo01g0697 1307 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 674 1285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0697 Amo-Chr1 9923323 9950191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0697 57 640 Receptor kinase-like Gene Family AT1G70520 38.087 5.24e-119 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo01g0697 PK_Tyr_Ser-Thr 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0697 - - vra:106775622 1595.87