Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0620 AAGAAATCTAAAACCCACGTGAAAACTAAACGCAGCGTTTTGAAGAAACAAGAAATAAAAGGGTTTTTGATTCCATCAGCAGAGAGACAGAGAGAGAGAAAGAGAGAAACGATAAACGCAAACCAAAGAGGTCTCACTCTTCCGCTCACATTTCTCAAATTCATACTCATACTCGTTCTCGCAGTAACCATGGCTGATGAACCACAAAATGATATGAAGGAGGAGGTTGCAGAGATTACCCCATTTGATCCTAGTAAGAAGAAGAAGAAAAAGAAAACTACAATCATAGATCCTGCAGATGATCTGGACAAGTTGGCTGAGAAGACTGAAAATTTAACAGTGGCTGAAGGGGTTGAGAGTACATTTGTTGGTTTGAAAAAGAAGAAGAAGAAACCTGTTGAAATCAGCAACTTAAATGAAGAGAGTGGAGATGCAGTTGAAGATTTGGATGATGTTGCTGAACAAGATGAAGGAGACCCAATTTCCTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATCAATATGAGGAGCTTCTTGGCAGGGTGTTCAACATTCTACGTGAGAATAATCCGGAACTTGCTGGAGACAGGCGGAGAACTGTTATGAGACCTCCACAGGTTCTTCGTGAAGGCACGAAGAAAACTGTTTTTGTGAATTTTATGGACCTATGCAAAACGATGCATCGACAGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTTTGGATGGACAGCAAAGACTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAATATGTTATTTGCCTTGGGTGTAAAAGTCCTGACACAATACTTTCCAAGGAGAATCGTCTGTTCTTCCTTCGATGTGAGAAGTGTGGATCAGGAAGATCAGTTGCTCCGATCAAGGCTGGTTTTGTGGCTCGTGTTGGCCGTAGGAATGCGGGCACATGA 993 0.426 KKSKTHVKTKRSVLKKQEIKGFLIPSAERQRERKRETINANQRGLTLPLTFLKFILILVLAVTMADEPQNDMKEEVAEITPFDPSKKKKKKKTTIIDPADDLDKLAEKTENLTVAEGVESTFVGLKKKKKKPVEISNLNEESGDAVEDLDDVAEQDEGDPISLQPRYPWEGSDRDYQYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0620 330 SMART eIF2Bneu4 200 309 IPR002735 GO:0003743|GO:0006413
Amo01g0620 330 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 279 314 IPR016190 GO:0003743|GO:0006413
Amo01g0620 330 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 64 330 - -
Amo01g0620 330 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 175 282 IPR016189 GO:0003743|GO:0006413
Amo01g0620 330 Gene3D - 173 315 - -
Amo01g0620 330 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 64 330 IPR045196 GO:0003743|GO:0006413
Amo01g0620 330 Pfam Domain found in IF2B/IF5 200 308 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0620 Amo-Chr1 9016184 9020146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0620 64 326 Eukaryotic Initiation Factors Gene Family AT5G20920 77.903 1.61e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0620 K03238 - gmx:100783618 459.529