Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0601 ATGGCTTACACTCTTACCCACTCCTTATCCCATGTCTTAGCCTCATTGGCATCCTTAATTATTATGATTTCTAGCTTTACAATTCTCAAATTCCTAAGCCCTTTCTTTATTAAGAATAAAAAATCACATAAAATACCCAAATTACCCCCAGGTCCCAAACCATGGCCTATAGTAGGTCTTCTTCCTGAAATGCTAACAAACAAACCGGTTTTCCGGTGGATTCACAAAGTCATGGAAGAAATGAACACCGAAATTGCATGTTTCCGCATAGGAAATGTCCATGTTATCCCTGTAACATGTCCTAAACTTGCTTGTGAATTCCTAAGAAAATATGATGCTGATTTTGCTACAAGGCCATTAAGCATGGCGACTGAAACCGCCACAAATGGTTACTTGACAACAGCACTTACACCCTTTGGAGAGCAATGGAGGAAAATGAAGAAAATAGTGGCCAATGATTTGTTGTCCGCACAAAAACATCAATGGCTTCAAGACAAAAGGGACCAAGAATCCAACAACCTTGTCTTTCAACTTTACAATAAGTGCATAAACAACAACAACGATAACAATAATAACAATAATGTTAACAAGGACAATTGTTTTGGTCTTGTTAATGTTAGAAGTGTTGCAAGACACTATTGTTCCAATGTCGCAAAGAGGCTAATCTTCAACATAAGGCACTTTGGTGAGGGTGGCATTGATGGTGGGCCATCTTTTGAGGATGAGGAGCATCTTATTAGTGGCACTTTTAAATTGCTTAAGTACATTAATGCATTTTGTGTCACCGATTACATGCCATGCTTGAAGGGATTATATGATTTTGATGGGCATGAGAGTGAGATTAAGGAGGCTATGAGGATTATGAACAAGTATCATGATCCAATCATTGAAGAGAGAATCAAGCAATGGAATGATGGGTTGCGGAATGAACAAGAGGACTTTCTTGATGTTTTGATCAATTTGAAAGATTCCAATAATGCACCATTGTTGACACCCATGGAGATCAAGTCACAAATTATAGAATTGATGATGGCAGCCATTGATAATCCATCAAATGCAGTTGAATGGGCACTTGCAGAAATGATAAACCAACCTGAATTGCTTCAAAAAGCAATTGAAGAATTGGACAGAGTTATTGGAAGAGACAGAATGGTAGAAGAATTAGATATCCCTAAACTAAACTATATAAAAGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCAATTGTACCTTTCAATGTTCCTCATGTCTCAATAAAGAACACAATTATTGGCAATTACCTAATCCCAAAGGGTAGCCATATCCTACTAAGTAGACAAGGTCTTGGGAGAAACCCTAAGGTTTGGAAAGAACCACATAAGTTCAAACCTGAACGACACATCAAGAGTGATGGTGATGATGTCGTTTTGGCTGAGCCAAATTTGAGGTTCATGTCGTTTAGTACCGGAAGACGTGGTTGCCCTGGAGTGATGCTTGGAACCACCATGACTGTGATGTTATTTGCAAGATTGCTTCATGGCTTCCATTGGAGTGCACCTCCCAATGTGTCAAGCATCAACCTTGCTGAGTGTAATGATAATTTGCCTTCTTGCTAA 1596 0.3891 MAYTLTHSLSHVLASLASLIIMISSFTILKFLSPFFIKNKKSHKIPKLPPGPKPWPIVGLLPEMLTNKPVFRWIHKVMEEMNTEIACFRIGNVHVIPVTCPKLACEFLRKYDADFATRPLSMATETATNGYLTTALTPFGEQWRKMKKIVANDLLSAQKHQWLQDKRDQESNNLVFQLYNKCINNNNDNNNNNNVNKDNCFGLVNVRSVARHYCSNVAKRLIFNIRHFGEGGIDGGPSFEDEEHLISGTFKLLKYINAFCVTDYMPCLKGLYDFDGHESEIKEAMRIMNKYHDPIIEERIKQWNDGLRNEQEDFLDVLINLKDSNNAPLLTPMEIKSQIIELMMAAIDNPSNAVEWALAEMINQPELLQKAIEELDRVIGRDRMVEELDIPKLNYIKACAREAFRLHPIVPFNVPHVSIKNTIIGNYLIPKGSHILLSRQGLGRNPKVWKEPHKFKPERHIKSDGDDVVLAEPNLRFMSFSTGRRGCPGVMLGTTMTVMLFARLLHGFHWSAPPNVSSINLAECNDNLPSC* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0601 531 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 14 527 - -
Amo01g0601 531 Pfam Cytochrome P450 49 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 SUPERFAMILY Cytochrome P450 47 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 Gene3D Cytochrome P450 41 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 480 489 IPR017972 GO:0005506|GO:0016705
Amo01g0601 531 PRINTS E-class P450 group I signature 103 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 477 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 487 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0601 531 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0601 Amo-Chr1 8760687 8763063 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0601 38 528 Cytochrome P450 AT2G22330 52.642 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0601 - K14984 gmx:100809902 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0072 11 964724 967239 Amo01g0601 01 8760687 8763063 hybridization