Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0590 ATGAAATCTTCTTTTACCTCCATGATGCTCTCTCACCCAATTTTTTACTTCTTTTTCATGCTGTTTGGCATCATACTCCTCTACATCAAAATCCTCAAACCCAACGATTCAACCAAGAAACAAGAGAAGCATAGGTTTCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAACATCCCTGAAATGCTCGCAAACAAACCCACATTCAGATGGATACAGAACATCATGAATGATCTCAACACTGAAATCGCATGCATTCGTCTAGGCAACATCCATGTCATCCCAGTGACAAGTCCTTCCATTGCACGCGAGATTTTAATGAAGCAGGATGCGATCTTCGCATCACGGCCATTGAATTGGTCAAGTGAGCATGTCTCATTAGGGTACTTAACCATAGGTCCATCACCTTTTGGACAACAATGGAAGAAAATGAAAAGAGTAATCACCAATGAATTGGCGTCTCCGCTTCGACTTCAATGGCTACATGACAAAAGGGCGGAAGAAGCCGACAACCTTGTTCAGTACATGTACAATCAGTGCAATAATGGCGGTGCCCTAGTTGATATAAGGCTTGCAGGAAAACACTATGGGGGAAACTTGATTAGAAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGAGAAGATGGAGGACCAGGTGCTGAGGAAGTGGAACATGTTGAAGCATTGTTGAATGTGTTAAATTACCTTTTTGCATTTTCTATTTCTGATTATGTTCCATTAATGAGGGAGTTTGATTTGGATGGTCAAAAAGAAGCAATGAAGAAGGCTATTAATACCCTAAGGAAGTACCATGATCCCATCATTGAAGAAAGGATTCGTCAATGGAAGAATGGGATAAGAACACATCAAGAGGATTGGCTTGATGTTCTTATCTCTCTCAAAGATGCTAACAACAATCCATTCTTGACTCTGGACGAAATCAAAGCTCAAATTATGGAGATTATGATGGCAACAATAGATAATCCATACAACAACATTGAATGGGTGCTGGCTGAAATGTTAAATCAACCAAAGCTACTTCAGAAGGCTACCGAGGAATTAGACGATGTTGTAGGAAAAGAAAGACTAGTGCAAGAATCAAATATTCCAAAACTCAATTATATAAAGGCATGTATAAGAGAAGGTTTTCGACTTCATCCAATCGTTGACTTCAACATTCCTCATGTCTCCATGGAAGACACTATACTTTCTAATTACTTCATTCCAAAGGGTAGTCATATTCTCATTAGGAGACAGGGTATTGGCCAAAACCCAAAAGTTTGGAAAGACCCATTAAAATTCAAACCTGAAAGACATTTGAAGAATGATGGGTCTAACTTAACTTTAATTGACCCTAATTTAGAGACTTTCACATTTGGCACCGGAAAACGTAGTTGTCCTGGGATTACAATTGGTTCTACGATGACTATTATGTTATTTGCAAGGTTGGTGCATGGATTTACTTGGACTACACCACCCAATGAACATATCATTGATCTTTGTGAATGTGTAGGTGATACTTCAAAAGCTAAGCCACTTGTAGCATTGGGAAAACCAAGGTTAGCGGCAGAGGTTTATCACAAATTAGATCAAAAGAAAAATATCTGA 1614 0.3922 MKSSFTSMMLSHPIFYFFFMLFGIILLYIKILKPNDSTKKQEKHRFPPGPKPWPIVGNIPEMLANKPTFRWIQNIMNDLNTEIACIRLGNIHVIPVTSPSIAREILMKQDAIFASRPLNWSSEHVSLGYLTIGPSPFGQQWKKMKRVITNELASPLRLQWLHDKRAEEADNLVQYMYNQCNNGGALVDIRLAGKHYGGNLIRRLLFNKRYFGNGREDGGPGAEEVEHVEALLNVLNYLFAFSISDYVPLMREFDLDGQKEAMKKAINTLRKYHDPIIEERIRQWKNGIRTHQEDWLDVLISLKDANNNPFLTLDEIKAQIMEIMMATIDNPYNNIEWVLAEMLNQPKLLQKATEELDDVVGKERLVQESNIPKLNYIKACIREGFRLHPIVDFNIPHVSMEDTILSNYFIPKGSHILIRRQGIGQNPKVWKDPLKFKPERHLKNDGSNLTLIDPNLETFTFGTGKRSCPGITIGSTMTIMLFARLVHGFTWTTPPNEHIIDLCECVGDTSKAKPLVALGKPRLAAEVYHKLDQKKNI* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0590 537 Pfam Cytochrome P450 47 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 18 528 - -
Amo01g0590 537 Gene3D Cytochrome P450 38 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0590 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Amo01g0590 537 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 528 - -
Amo01g0590 537 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0590 Amo-Chr1 8629812 8632691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0590 8 528 Cytochrome P450 AT5G05260 50.372 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0590 - K12153 gmx:100809902 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0080 11 1025681 1030285 Amo01g0590 01 8629812 8632691 hybridization