Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0581 ATGGCTATCCACTCATCAAATAATAATTACTTCTACATTATGTTTATTTGTTCCCTATTATTTGGCATATGTTCATCTCAGCTAACATCAAATTTCTATGATTCAACATGTCCCAAGGCACTCTCTATAATCAAATCTGCAGTGGCCAGTGCAGTGGCGAAAGAGCATCGAATGGGTGCATCGTTGCTTCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAATTCTATTGGATGACACTTTAACATTTACGGGAGAGAAGACAGCTGCTCCAAATTTGAATTCTGTTAGAGGTTTTGATGTAATTGATAACATCAAATCTCAATTGGAGAGTGCTTGTCCTGGAATTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGATTCTGTTGTTTCATTGGGTGGTCCATCATGGAATGTTGGACTGGGAAGAAGAGATTCAACAAGTGCAAGCAAAGATGCAGCAACTAAGGATATTCCATCCCCTCTTTTGGATCTTAGTGGCCTCATAACTGCTTTCTCCAATAAGGGTTTCACCACTCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGACAAGCAAGATGCCAAATATTCAGAGGAAGAATCTACAATGAAACAAACATTGACACAAACTTTGCAACATCAATGAAATCAAATTGTCCAAGCAGTGATGGAGACAGCAACCTCACAGCACTTGATGTCACAACAAATGTGCTRTTTGACAATGCTTACTTCAAGAACCTTGTCAACAACAAAGGCCTTCTTCATTCTGATCAGCAGCTCTTTATTAGTGGCGGTTCCACTAACTCTCTTGTCACTAACTATAGCAACAGTTATTCAGCTTTCTTTGCTGACTTCGCTAGTGCTATGGTCAAAATGGGAAATTTAAGCCCTTTAACTGGTACAACTGGCCAGATTCGTGCCAATTGCACCAAAGTTAATTAA 966 0.3975 MAIHSSNNNYFYIMFICSLLFGICSSQLTSNFYDSTCPKALSIIKSAVASAVAKEHRMGASLLRLHFHDCFVNGCDASILLDDTLTFTGEKTAAPNLNSVRGFDVIDNIKSQLESACPGIVSCADILAIAARDSVVSLGGPSWNVGLGRRDSTSASKDAATKDIPSPLLDLSGLITAFSNKGFTTQEMVVLSGAHTTGQARCQIFRGRIYNETNIDTNFATSMKSNCPSSDGDSNLTALDVTTNVLFDNAYFKNLVNNKGLLHSDQQLFISGGSTNSLVTNYSNSYSAFFADFASAMVKMGNLSPLTGTTGQIRANCTKVN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0581 321 SUPERFAMILY Heme-dependent peroxidases 27 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Amo01g0581 321 Gene3D - 31 317 - -
Amo01g0581 321 PANTHER PEROXIDASE 20 321 - -
Amo01g0581 321 Gene3D Peroxidase, domain 2 165 300 - -
Amo01g0581 321 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 Pfam Peroxidase 45 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 ProSiteProfiles Plant heme peroxidase family profile. 27 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0581 321 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
Amo01g0581 321 PANTHER PEROXIDASE 72-RELATED 20 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0581 Amo-Chr1 8506496 8509643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0581 23 321 Peroxidase AT5G05340 63.123 8.38e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0581 K00430 - gmx:100818176 507.679