Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0580 ATGAGTAATTCTCAAATAATCCAGTATTATTTTTTGGTTATTGTTGTTATGGTCACTACTAATTTGGGCACATGGGTAATCCCTACCAATGGCATGAACAATGATGATAATGGAAGGCTCACTCACCATTTCTATAAGAAAACATGCCCTAAGGTGTTGCCAGTGATAAGGTCTGTGGTTGAAAAGGCAATAAAGAAAGAACCGCGCATTGGAGCTTCATTGCTACGTTTGCATTTTCATGACTGCTTTGTTAATGGTTGTGATGGATCGATTCTGCTAGATGACACGAAGAACTTCACCGGAGAGAAGACAGCAAAACCAAACCTTAACTCAATCAGAGGTTTCGACGTGGTTGATGAGATTAAGGCTGCTGTTGATAAAGCTTGCAAACGACCTGTCGTTTCATGTGCCGATATCTTAGCTGTTGCTGCTCGTGACTCTGTTGCCATTTTGGGTGGTCCACAATTTTGGTACAAAGTACTATTAGGAAGAAGAGACGCAAGAACCGCAAACATAACCGCCGCAAATAACAACCTACCAGCACCATTCTTAAACTTCACACAATTGGTTACAAGCTTCAACAACGTTGGACTAAACACCAAGGACCTAGTTGTACTTTCAGGTGGCCACACAATTGGGTTTGCAAGGTGCACAACGTTCAGGAACAGAATCTACAACGACACAAACATTGAAACTAATTTTGCAACTTCTCTAAGGAGGAATTGTCCTAGGACTAGTGGTGTTGGGGACAACAATTTGACACCGTTGGATCCAACTCCATCAAGCGTTGATAATTTGTACTACAAGGCGTTGTTGGGCAAAAAGGGAATTTTACATTCGGATCAGGAGTTATATAAGGGGAATGGTAGTGAGAGTGATAAGTTGGTGGAGCTTTATAGCAAGAACCCTTTTGCGTTRGCTAGAGACTTCAAAAATTCAATGATCAAAATGGGTAATATGAAGTCTCTWACTGGAAACAATGGTGAGATTKGGCTCGATTGCAGAAGGGTTAATTAA 1017 0.41 MSNSQIIQYYFLVIVVMVTTNLGTWVIPTNGMNNDDNGRLTHHFYKKTCPKVLPVIRSVVEKAIKKEPRIGASLLRLHFHDCFVNGCDGSILLDDTKNFTGEKTAKPNLNSIRGFDVVDEIKAAVDKACKRPVVSCADILAVAARDSVAILGGPQFWYKVLLGRRDARTANITAANNNLPAPFLNFTQLVTSFNNVGLNTKDLVVLSGGHTIGFARCTTFRNRIYNDTNIETNFATSLRRNCPRTSGVGDNNLTPLDPTPSSVDNLYYKALLGKKGILHSDQELYKGNGSESDKLVELYSKNPFALARDFKNSMIKMGNMKSLTGNNGEIXLDCRRVN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0580 338 Gene3D Peroxidase, domain 2 180 317 - -
Amo01g0580 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Amo01g0580 338 Pfam Peroxidase 57 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 CDD secretory_peroxidase 40 337 IPR033905 GO:0004601|GO:0042744
Amo01g0580 338 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Amo01g0580 338 ProSiteProfiles Plant heme peroxidase family profile. 39 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 SUPERFAMILY Heme-dependent peroxidases 40 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 PANTHER PEROXIDASE 72-RELATED 26 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0580 338 Gene3D - 43 335 - -
Amo01g0580 338 PANTHER CATIONIC PEROXIDASE 26 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0580 Amo-Chr1 8483579 8500690 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0580 38 338 Peroxidase AT5G05340 57.947 4.51e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0580 K00430 - gmx:100816056 465.307