Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0576 ATGAAAAGAAAATGTCCACAAGTTTTCAATGCTGTGAAATCTGTTGTTGAAGATGCTGTGGCCAAAGAACAACGCCTTGGTGCTTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTATTGATGGGTGTGATGGATCATTGTTATTGGATGATACATCAACATTCAAAGGAGAGAAGACAGCAGCAGCAAATAACAACTCAGTGAGAGGGTTTGAAGTAATTGATGCAATCAAGTCAAAGGTTGAAGCTTTGTGCCCCGGTGTTGTTTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGATGCTGTTGTTATTCTTGGAGGGCCTTTTTGGGATGTGAAACTTGGAAGAAGGGATTCAAGAACAGCAAATTTCACAGCTGCCAACACTGGTGTAATTCCAGCTCCCACTTCTAACCTTAGTACCCTAATTTCCAATTTTAAGTCACATGGCCTTGATGTCAAGGACTTGGTTGCCTTATCTGGATCTCACACAATTGGCAAAGCAAGGTGTACAAGTTTCAGAGGTCACATATACAATGACACCGACATTGACCCTTCATTTGCCAAGTTAAGGCAGAAAAATTGTCCAAGGCAAAATGGCACAGGAGACAACAATTTAGCACCCTTGGACCTACAAACACCCACACATTTTGAGAACAACTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCACTTGTTAAGGCCTATAGTCAGAATAATAAGGCCTTTGCTTCTGACTTTGTTACTGGAATGATTAAGATGGGGAACATCCTGCCCTTAACTGGGTCAAAAGGGGAGATAAGGAAGAATTGCAGAAGAGTGAATTAG 876 0.4155 MKRKCPQVFNAVKSVVEDAVAKEQRLGASILRLFFHDCFIDGCDGSLLLDDTSTFKGEKTAAANNNSVRGFEVIDAIKSKVEALCPGVVSCADILAIASRDAVVILGGPFWDVKLGRRDSRTANFTAANTGVIPAPTSNLSTLISNFKSHGLDVKDLVALSGSHTIGKARCTSFRGHIYNDTDIDPSFAKLRQKNCPRQNGTGDNNLAPLDLQTPTHFENNYYKNLINKKGLLHSDQELFNGGSTDSLVKAYSQNNKAFASDFVTGMIKMGNILPLTGSKGEIRKNCRRVN* 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0576 291 ProSitePatterns Peroxidases proximal heme-ligand signature. 156 166 IPR019793 -
Amo01g0576 291 CDD secretory_peroxidase 2 290 IPR033905 GO:0004601|GO:0042744
Amo01g0576 291 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Haem peroxidase superfamily signature 27 41 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Haem peroxidase superfamily signature 89 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PANTHER PEROXIDASE 72-RELATED 4 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 SUPERFAMILY Heme-dependent peroxidases 3 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 ProSitePatterns Peroxidases active site signature. 27 38 IPR019794 GO:0004601
Amo01g0576 291 Pfam Peroxidase 12 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 Gene3D Peroxidase, domain 2 134 270 - -
Amo01g0576 291 Gene3D - 2 291 - -
Amo01g0576 291 PANTHER PEROXIDASE 4 290 - -
Amo01g0576 291 PRINTS Plant peroxidase signature 5 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 209 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 88 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 265 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 155 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 69 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 225 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 PRINTS Plant peroxidase signature 29 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo01g0576 291 ProSiteProfiles Plant heme peroxidase family profile. 1 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo01g0576 Amo-Chr1 8429780 8434056 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0576 4 291 Peroxidase AT5G05340 64.931 3.83e-142 401
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0576 K00430 - gmx:100813384 459.144