Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0573 ATGGAGAGTAAATCAATTGTTCTGTTGGAAAGATATGAGTTAGGAAGATTACTAGGGCAGGGTACCTTTGGGAAGGTTTACTATGCACGGAGTGCAATAACTAACCAGAGTGTGGCTATTAAGATGATTGACAAAGATAAGGTTATGAAAACTGGGCGTGCCGAACAAATCACACGCGAGATATCTGTTATGAGAAGGGCTAGGCATCCCAATATTATACAGCTTTTCGAGGTTATGGCCACCAAGACTAAGATTTACTTTGTTATTGAAATTGCTAAAGGTGGTGAACTCTTCGACAAGGTGTCCAAGGGAAAACTCAAGGAAGATGTTGCTCACAAGTATTTTAGGCAGCTAATCAATGCAGTAGATTATTGTCACAGTAGAGGCGTATACCACAGAGATATAAAGCCGGAGAACATTCTGTTGGATGAAAATGGGGACCTAAAGATATCTGATTTRGGGTTAAGTGCGCTCGCGGAGTCCAAGCGGCAGGATGGCRTACTCCATACACCTTGTGGCACCCCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTGCAAAAGCTGATATTTGGTCTTGTGGAATTGTTCTATTTGTCTTATTGGCAGGTTTTCTCCCTTTTCATGATGCAAATTTGATAGAGATGTATAAGAAAATAAGCAAGGCTGAATTAAAATTCCCAACTTGGTTCCCGCCAGAAGTATGCAGGTTGTTGAGAAAGATGCTGGATCCAAATCCTGAAACCAGGATTACTATTGCCAAGATTACAGAAAATTCTTGGTTTAAGAGAGGACCTAAAGCTAAGCACAAAAAACTTGACGCAGAAACCACTAGCGTCTCTTCAGGTACAGTTTCTGATCTAAGTGATGAAGGTGAAGGTCTAGCAGCAGAAGCAAAGGAAGAACCAGCTGTGGCAACAAGTATAAATGCATTTGATATCATCTCCCTTTCTGCTGGTTTCGATCTTTCTTCATTTTTCGAAGACAGTTTTCAGAAAAGAGAAGCAAGGTTTAGTTCAAGACAACCTGCATCGGTCATCTTCTCCAAGCTGGAAGATGCTGCCAAGCGACTAAAGCTGAAGATAAAGAAAACAGCAGCTGGCTTGGTGAAATTGGATGGTTTAACCGAAGGTAGGAAGGGGGTTTTATCAATTGATGCRGAGATTTTCGAGGTTACTCCTATGTTCCATCTGGTGGAGGTGAAGAAATCCAATGGAGATACATTGGAATACCAGAAAATACTGCAAGAGGGTATAAGACCTGCACTTAAGGATATTATTTGGGTCTGGCAAAATGACCAACAGCAGCAACCACAAGAGCCAGAAGAACAGCCGCAGATAGATGACCAGCCGCCACAACCACCCGAGTCATAA 1386 0.4214 MESKSIVLLERYELGRLLGQGTFGKVYYARSAITNQSVAIKMIDKDKVMKTGRAEQITREISVMRRARHPNIIQLFEVMATKTKIYFVIEIAKGGELFDKVSKGKLKEDVAHKYFRQLINAVDYCHSRGVYHRDIKPENILLDENGDLKISDLGLSALAESKRQDGXLHTPCGTPAYVAPEVIKRKGYDGAKADIWSCGIVLFVLLAGFLPFHDANLIEMYKKISKAELKFPTWFPPEVCRLLRKMLDPNPETRITIAKITENSWFKRGPKAKHKKLDAETTSVSSGTVSDLSDEGEGLAAEAKEEPAVATSINAFDIISLSAGFDLSSFFEDSFQKREARFSSRQPASVIFSKLEDAAKRLKLKIKKTAAGLVKLDGLTEGRKGVLSIDAEIFEVTPMFHLVEVKKSNGDTLEYQKILQEGIRPALKDIIWVWQNDQQQQPQEPEEQPQIDDQPPQPPES* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0573 461 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0573 461 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Amo01g0573 461 CDD CIPK_C 314 428 - -
Amo01g0573 461 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 447 - -
Amo01g0573 461 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Amo01g0573 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Amo01g0573 461 MobiDBLite consensus disorder prediction 434 448 - -
Amo01g0573 461 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Amo01g0573 461 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Amo01g0573 461 PANTHER - 2 447 - -
Amo01g0573 461 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0573 461 Gene3D Transferase(Phosphotransferase) domain 1 99 310 - -
Amo01g0573 461 MobiDBLite consensus disorder prediction 434 461 - -
Amo01g0573 461 Gene3D Kinase associated domain 1, KA1 311 433 - -
Amo01g0573 461 Pfam NAF domain 311 368 IPR004041 GO:0007165
Amo01g0573 461 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0573 Amo-Chr1 8395414 8397850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0573 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 66.740 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo01g0573 Pkinase 9.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0573 - - gmx:100790905 679.863