Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0571 ATGTCTTCTTCTTCATTTTCATCATCATCGTCAACTTCTTCTTCTTCATTATCATCATCATCAACAACTCTTCAATGGTTAAGTTTAGTAGGAATAATTTGGCTCCAATCCATAAATGGAACAAACACAAATTTTCCAGCATACTCTTCCCAACTCAAAGAGCTTCTCTCAATCTCCCAAATCCAACTCAACAACCTTGCTTTTGCCTCAGATGCTGGAAAACTCTTTGGTTGGTTCTCTGGCCTTGCTTCTCTCTACCTTCCCCTTTGGCTTGTTCTAATCATAGGTTCAACTCTTGGCCTCATTGGTTATGGTGTTCAATATCTCTTCCTAACTAACCATATCTCAAATCTCTCTTATTGGCATGTTTTCTTGCTAACTTTCCTTGCTGGCAATAGCATTTGTTGGATCAACACAGTTTGTTATGTTGTTACAATAAGAAATTTCTTGTCTCATAGTCAAGTAGCTGTTGGAATCACAACTAGTTACCAAGGTTTGAGTGCTAAGGTTTATACCAATGTTGTTGATGCTTTTTTCTCACCACAAAAGAACAAGGCTAGAGCATTTTTGTTGCTAAACTCTGTTTTGCCCTTGGCAATAGGGTTAATTGTAGCTCCTATTCTTAGACAAACCAAAGCCACATCAAATTCATCAAGTGATTATTATATTGGGTTTGGTGTGATTTTTGTGATCACAATTGCAACTGGGATTTATGCTGTGGTTAGTATTTTGGAATTTGTGTCTAGCAAAATTTCATCACTTGGGGTTTTAATTGGTATCTTAGTGTCACTTTTCTTGCCACTATTGGTTCCAATTTCATTCAAGATCAATCAATTAGTTAAATCATGGCATGAAAATAGGGAGAAGCTTAGAGTGTACCATTACACTCTAGAGGAGAATTACATCACCAATACTAATAATGATGAAGTCAAAGAGAGTGATGAAGAAGAAGAAAAAGAAGTGTGTGTTGTTAGAGAAGAAATTGGAGTGAATTTGATGGTCAAAAGAATAGACTTTTGGTTATATTTCTTTGTGTACTTTTTTGGTGCAACAATTGGTTTGGTTTTTCTTAATAACTTGGGACAAATTGCTGAATCAAGAGGAAGCTCTAACACTTCATCTTTGGTGTCTTTGTCTTCATCCTTTGGTTTCTTTGGAAGACTCATGCCATCTCTCATGGACTATTTCCACAGGGGAAAATCCAGAGTTTCAAGGCCAGCTTGCATGGTAGCACTAATGTCACCAATGTCATGTGCATTCTTCTTGTTACAAAACAGCACCGAAATCTCACTTTACATCAGCACTGCACTCATTGGCGTCTGCACCGGAGCAATCACTTCCATTGCTGTCTCCACCACAACTGAGTTATTTGGAACAAAGAATTTTTCGGTGAATCACAACGTTGTTGTTGCCAACATTCCAATAGGGTCCTTCATTTTTGGTTACTCGGCTGCTATTCTCTACCATAAGGAAGGGTATAATAGTAATAACATTAATAATCATGGCAAATGCATGGGAATGGATTGCTATGCTAACACTTTCAAAATTTGGAGTTGTTTTTGTCTCCTTGGAACTTTTTTGGCTCTCATACTATATGTTAGGACACGCAAATTTTACTCACAAAGATAG 1629 0.372 MSSSSFSSSSSTSSSSLSSSSTTLQWLSLVGIIWLQSINGTNTNFPAYSSQLKELLSISQIQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLIIGSTLGLIGYGVQYLFLTNHISNLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSHSQVAVGITTSYQGLSAKVYTNVVDAFFSPQKNKARAFLLLNSVLPLAIGLIVAPILRQTKATSNSSSDYYIGFGVIFVITIATGIYAVVSILEFVSSKISSLGVLIGILVSLFLPLLVPISFKINQLVKSWHENREKLRVYHYTLEENYITNTNNDEVKESDEEEEKEVCVVREEIGVNLMVKRIDFWLYFFVYFFGATIGLVFLNNLGQIAESRGSSNTSSLVSLSSSFGFFGRLMPSLMDYFHRGKSRVSRPACMVALMSPMSCAFFLLQNSTEISLYISTALIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFIFGYSAAILYHKEGYNSNNINNHGKCMGMDCYANTFKIWSCFCLLGTFLALILYVRTRKFYSQR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0571 542 Pfam Nodulin-like 25 272 IPR010658 -
Amo01g0571 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 541 - -
Amo01g0571 542 Gene3D MFS general substrate transporter like domains 277 536 IPR036259 -
Amo01g0571 542 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 19 541 - -
Amo01g0571 542 SUPERFAMILY MFS general substrate transporter 40 537 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0571 Amo-Chr1 8345927 8348717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0571 20 542 Nodulin-like Gene Family AT2G30300 48.956 5.61e-156 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0571 - - aip:107616135 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0571 01 8345927 8348717 Amo17g0734 17 17051392 17053806 PCT
Amo17g0734 17 17051392 17053806 Amo01g0571 01 8345927 8348717 PCT