Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0567 ATGGCACCTCTCATTGTTGAAATGAAGGACGTTGTATTTATCAAACCATCTAAGTCTACACCTTCCTCTATTCTCTCTCTATCTACACTTGATCATAGACCTGACCTTAATATGCTATACCATATCATTCAAGTTTACAAATCACAAAAACATTATGCTTACCCAAATGACCAAATTGACCCTAACCCTATTAATGTGATAAAAGAAGCACTCTCAAAGGCCTTGTTCTATTACTACCCTCTTGCCGGTAAGATAGTCAAACATGATGATGGGAAGTTTAGAATCCATTGCAATTCCAATGATAGAGGAGTTCCATTTATAGAAGCAATTGCTAATTGCAATCTCTCTTCTCTTAATTACCTTGATGGTGGTAGTAGTGATGACATGGAAATTTCAAAACAATTGGCCTTTCAGCTTCCTTCACTAGGTGATGAAAATGGCCACCAATACCCTTCAAGGTTCAAGGTGACCAAGTTTCTATGTGGGGGATTCACAATTGGGATTGGGGTCTCACATGTTTTATGTGATGGATTTGGATTATCTCAATTTCTTCATGCCTTAATCGAGTTAGCAAGAGGAAGAAGCGAGCCATCAATAAAACCTGTTTGGGAGAGGGAGAGGCTGATGGGGTCAATTAACGAAATGCCCTTGCCGAGTCCGATAAATAATGCCTCGGCCGCGGTTTCACCACATCTTCCGGTCACGACACTCGTGCATGAATGCTTTAAGGTGGATGGAGAGAGTATAAGAAGACTCAAAATGAGATTGATCAAAGAATATACTAGTCACAATAATATTAAGACTATGAAAGAAATTTTCACAAATTTTGAATCACTCACTGCTTATATTTGGAGGTCAAGGGCTAAAGCCTTGAAACTAAACCATGATGGAAAAACTTTGCTAGGTATAGTAGTTGGGGCGAGAAGACATTTGGATCCACCTTTGCCTGAAGGGTATTATGGGAATGCAATTGTGGATGCAAATGTTGTCCTTTCAGTTAAAGAACTCATGGAGAAACCACTCTCACAAGTTGTGAAGCACATCAAAGAGATCAAGAAAGTTGCTTTTACTAGAAACTATATCACGGATTCAATTAACACTTTGGTGACAAAAGAACAAGATTTTAATGTGGAAGGTATCGGTGCATATTTTAATGTGACCGATTGGAAACATTTGGGTTTCTTGGAAAACATGGATTTTGGGGGGAATGTTCTTGTGAATTTATTACCAGCACCATGCAACATGTTTGCCATGGTGGATTTGTGCATTTTTGCACCTCCTAGCAAGTTGGATTCATCAATGAAAGATGGAGGAGTTAGGATTTTTGTGTCTCTTCCTAATGATGCCATGCCCAAGTTCAGAGAGGAGATGGAAGCTCTTATACTTCTTAATAATATTTGA 1401 0.3883 MAPLIVEMKDVVFIKPSKSTPSSILSLSTLDHRPDLNMLYHIIQVYKSQKHYAYPNDQIDPNPINVIKEALSKALFYYYPLAGKIVKHDDGKFRIHCNSNDRGVPFIEAIANCNLSSLNYLDGGSSDDMEISKQLAFQLPSLGDENGHQYPSRFKVTKFLCGGFTIGIGVSHVLCDGFGLSQFLHALIELARGRSEPSIKPVWERERLMGSINEMPLPSPINNASAAVSPHLPVTTLVHECFKVDGESIRRLKMRLIKEYTSHNNIKTMKEIFTNFESLTAYIWRSRAKALKLNHDGKTLLGIVVGARRHLDPPLPEGYYGNAIVDANVVLSVKELMEKPLSQVVKHIKEIKKVAFTRNYITDSINTLVTKEQDFNVEGIGAYFNVTDWKHLGFLENMDFGGNVLVNLLPAPCNMFAMVDLCIFAPPSKLDSSMKDGGVRIFVSLPNDAMPKFREEMEALILLNNI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0567 466 Pfam Transferase family 6 459 - -
Amo01g0567 466 Gene3D - 232 457 IPR023213 -
Amo01g0567 466 Gene3D - 3 216 IPR023213 -
Amo01g0567 466 PANTHER ACYL TRANSFERASE 4 2 461 - -
Amo01g0567 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0567 Amo-Chr1 8282923 8284323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0567 6 455 Monolignol Biosynthesis Gene Families AT5G48930 26.824 4.62e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0567 K20240 - gmx:100801843 489.574