Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0566 ATGGCACATCAAATTAATATTGCATCCTTCAAAATTGAAAACAAAGATGTTGAATATGTGAAACCATCGAAACCTACTCCTTCCACTACACTTTCTCTATCCACAATTGATAATAGGCCTGAATTCCTTCCCCTAAGTCAAGTCATTCGTGTATACCAATCACAAAACAACAACCCCACAAAGAAAAATTATTATTCCAAAAATGACCCTGCCATTGTGATAAAAGAAGCACTATCAAAGGCTTTGGTTTATTACTACCCTCTTGCTGGCAAGCTAGTGAAGCATCATAGCAACAATGGGAAGGTAACAATCAATTGCAATGAAGATGGTGTTCCATTTGTAGAAGCAATTGCAAATTGTGACCTTTCTTCACTCAATTATCTTGATTTGAGTGACATTGGAATTGCCAAAAATTTTGTGTATGATCCACCTTTTCATCAAGATGAAAATGGTAACCAACTAATATACCCTATGGTGGTGAAGGTGACTAAATTTCAATGTGGAGGGTTCACATTAGGGTTGGGGGAACCACACACCATTGCTGATGGGGCTGGTTCCATCAAGATCTTTCAAGCCATAGCCGAATTCGCGACCGGAAAAAGCGAGCCTTCGGTGAAGCCTGTGTGGGAAAGGGAGAGGCTAAATGGGTCAATAACCAAAACTCCATTGCTAAGTCCCATGGATGGAGCTTCGGCCGCCGGTTCGCCATATCTACCTTCCAAAACCCTAGTTCATGAATGTTTTAAGGTGGATGGTGAGAGCATAAAGAGACTCAAATTGAATTTGGCAAAGGAAATTGTTGATAACAATGTTCCAATTGCAAATGAAGAATTAAGCTTTACAAATTTTGAGTCCCTTGCTGCTTATGTTTGGAGGGCAAGAACTAGGGCATTGAAATTGAAGTATGATGGTAAAACTATGCTGAAATTTGCGGTAGGTATAAGAAGGCACATAGATCCTCCTTTGCCTGAAGGGTATTATGGTAATACCATTGTGGATGCAGATGTTGTGCTGGCGGTCAAAGAAGTCAACGAAAGACCACTCTCACAAGTGGTGAAGGCTATTAGAGAGTTGAAGAAGGTTGCTTTCACAAAAGAATTCATTAAGAATTCAATTGATACATTGGAGACAAGAGTTGAGGAGTTTGATTTTGATGGGAATGGTTCATGCATGGCTTTGGCTGAGTGGAAGCATTTGGGATTCTTGAGAAACATGGATTTTGGGTGGAAGGAGCCTGTGAATGTGATACCTGCCCCATGTAACATGTTTGGGGAAGTAAGTATTTGCATCTTCTTTCCTCCTTGTGACATGGATACTTCAATGAGTGGAGGTGTTAAGATCTATGTCTCACTCCCCATTGATGCCATGCCCAAGTTTAGGGAGGAGATGAAAACACTTGCAATTACTATTAGTTAA 1416 0.404 MAHQINIASFKIENKDVEYVKPSKPTPSTTLSLSTIDNRPEFLPLSQVIRVYQSQNNNPTKKNYYSKNDPAIVIKEALSKALVYYYPLAGKLVKHHSNNGKVTINCNEDGVPFVEAIANCDLSSLNYLDLSDIGIAKNFVYDPPFHQDENGNQLIYPMVVKVTKFQCGGFTLGLGEPHTIADGAGSIKIFQAIAEFATGKSEPSVKPVWERERLNGSITKTPLLSPMDGASAAGSPYLPSKTLVHECFKVDGESIKRLKLNLAKEIVDNNVPIANEELSFTNFESLAAYVWRARTRALKLKYDGKTMLKFAVGIRRHIDPPLPEGYYGNTIVDADVVLAVKEVNERPLSQVVKAIRELKKVAFTKEFIKNSIDTLETRVEEFDFDGNGSCMALAEWKHLGFLRNMDFGWKEPVNVIPAPCNMFGEVSICIFFPPCDMDTSMSGGVKIYVSLPIDAMPKFREEMKTLAITIS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0566 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 467 - -
Amo01g0566 471 Gene3D - 238 463 IPR023213 -
Amo01g0566 471 Pfam Transferase family 11 465 - -
Amo01g0566 471 PANTHER ACYL TRANSFERASE 4 4 467 - -
Amo01g0566 471 Gene3D - 6 223 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0566 Amo-Chr1 8259683 8261098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0566 11 430 Monolignol Biosynthesis Gene Families AT5G48930 27.477 4.08e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0566 K20240 - gmx:100783730 469.929