Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0563 ATGGCATACAAAAAACCATTCCTTGACCTTAAGCTTACCACGGAAGATGTTATCTTAGTAAAGCCATCAAAACCAACTCCTTCATCTGTAATCTCTCTATCCACAATTGATAATAGACCAGAACTTAATAGTCTATGTCAAACCATTCACATATTTAAACCACCAAATAACACTATTCTTATTGATGATCCTCAAAATGCCCAAAATGACCCTGCACTTGTGATCAAAGAAGCACTCTCCAAGGCTTTGTTCTATTACTACCCTCTTGCTGGAAGGCTTGTAAAACATGCTGATGGGAAACTTAGAATCCATTGCAATGCATATGGAGTTCCATTTGTGGAATCCATTGCAAATTGCAAGCTTTCTTGCCTTCACTACCTTGATGGCAGTGACACTGAAAATGCAAAACACTTGGCTTTTGATAATCCTTTTCATGAAGATGATGATGATGAAAATGGTTACCAATATCCCTTGGGAATAAAGGTGACCAAGTTTCTCTGTGGCGGGTTCACAGTTGGAATAGGCGCATCACATGCTGTTTTTGATGGAATTGGAGGATCTCAATTCTTTCAAGCCATGGCTGAACTTGCGAGCGGAAAAAGCGAGCCATCTGTGAAACCTGTGTGGGAGAGGGAAAGGCTAAATGGGTCAGTTACTGAACATCCATTGCTAAGTCCCATGGATGAGGCCTCGGCCGCAGTTTCACCTTACTTGACCACCAAAACTCTCGTGCATGAATGTTTTAAGGTGGATAGTGAGAGCATAAAAAGACTCAAAAAGAGTTTATTGAAGGAAATAAGTTATAGCAATAATATTGATTACTCTTTGGAGGGTGAAAGCTTTACAAGTTTTGAAGCCCTTGGTGCTTATGTTTGGAGGTCAAGAACTAGAGCTTTGAAACTCAACTATGATGGAAAAACTTCATTGGCTATTGTTGTAGGGTTAAGAAGGAATCACTCCTTGATTCCTCCTTTGCCTGAAGGGTACTATGGGAATGCTTTTGTGGACCCAAAAGTTGTGCTAACAGTAAAGGAACTCAATGAAAAGCCACTCTCACATGTGGTGAAGATGATCAAAGAGACTAAGAAGCTTGGTTTCTCAAAGGAGTATATTAGGAATGCTATTGACACAAAAGAGACAAAAATAGAGCACTTTGATTATCAAGGTATCGGTGCATCTATGGTTTTGTCTAGTTGGATGCACTTGGGTATGTTGGAAAACATGAACAAAGGGTGGGCTAAGCCAGTGAACATGGTACCGGCACCATGCAACATGTTTGGGACAGTTGGAGTGTGCATTTTTTCACCTCCTAGTGACTTGGATCCTTCAATGAATGGAGGTGTTAGAATCTTTGTTTCTCTACCTAATGATGCTATGCCCATGTTCAAGGAGGAGATGGAAGCTCTCATGCTTGTTAAACCATAG 1425 0.4056 MAYKKPFLDLKLTTEDVILVKPSKPTPSSVISLSTIDNRPELNSLCQTIHIFKPPNNTILIDDPQNAQNDPALVIKEALSKALFYYYPLAGRLVKHADGKLRIHCNAYGVPFVESIANCKLSCLHYLDGSDTENAKHLAFDNPFHEDDDDENGYQYPLGIKVTKFLCGGFTVGIGASHAVFDGIGGSQFFQAMAELASGKSEPSVKPVWERERLNGSVTEHPLLSPMDEASAAVSPYLTTKTLVHECFKVDSESIKRLKKSLLKEISYSNNIDYSLEGESFTSFEALGAYVWRSRTRALKLNYDGKTSLAIVVGLRRNHSLIPPLPEGYYGNAFVDPKVVLTVKELNEKPLSHVVKMIKETKKLGFSKEYIRNAIDTKETKIEHFDYQGIGASMVLSSWMHLGMLENMNKGWAKPVNMVPAPCNMFGTVGVCIFSPPSDLDPSMNGGVRIFVSLPNDAMPMFKEEMEALMLVKP* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0563 474 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 470 - -
Amo01g0563 474 Pfam Transferase family 11 468 - -
Amo01g0563 474 Gene3D - 229 466 IPR023213 -
Amo01g0563 474 PANTHER ACYL TRANSFERASE 4 6 470 - -
Amo01g0563 474 Gene3D - 8 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0563 Amo-Chr1 8229433 8230857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0563 10 464 Monolignol Biosynthesis Gene Families AT5G48930 26.582 2.66e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0563 K20240 - gmx:100801843 518.079