Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0554 AGGCCTCACCTCGTCACTCTCTCCCCTAACCTCGTCTCCCGTCCCTCACTTTTCTCTCTGTCTCGGACTCATCTCAGACTGAAGCTCGTCGTCACGGTCTCGCACTCTGTCGCGCCTTCCCTGCGCTCGCTTCGTCGGCGGCAGAAGCAGACGGAACCAGCATCTGGTCCCTCGGGCGGTGGTGGTGGTCGTCTTCTTGTTTCAGCCGTTAGTTCAGTTGGTCAACTTCCTCCACCGTCGGTCCCAGTGTGTGTGCATCATAGCTTAGTATATCTCATTGCCTCTAGAGTTCGGAGAGAAGAGATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCGTTCATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAAGCCGAGCGAAACTCGCAAGAGATGTCAGAACAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATTTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTTCGCCCATTCATCGGAAGAGCTTTACAGGCATTCTATAAGCACGATAGTCCGGAGTTGATACCGGATCCGGAGAGAGTTCCTGATAGGCGACCGCAAGTAGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAA 936 0.4893 RPHLVTLSPNLVSRPSLFSLSRTHLRLKLVVTVSHSVAPSLRSLRRRQKQTEPASGPSGGGGGRLLVSAVSSVGQLPPPSVPVCVHHSLVYLIASRVRREEMAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMSVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVPDRRPQVVQNAPRRQLRR* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0554 311 MobiDBLite consensus disorder prediction 286 311 - -
Amo01g0554 311 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 102 292 IPR007257 GO:0005634|GO:0006260
Amo01g0554 311 SUPERFAMILY GINS helical bundle-like 174 282 IPR036224 -
Amo01g0554 311 MobiDBLite consensus disorder prediction 41 55 - -
Amo01g0554 311 Pfam GINS complex protein 155 263 IPR021151 -
Amo01g0554 311 Gene3D - 113 178 - -
Amo01g0554 311 MobiDBLite consensus disorder prediction 41 63 - -
Amo01g0554 311 CDD GINS_A_psf2 167 283 - -
Amo01g0554 311 Gene3D - 179 286 - -
Amo01g0554 311 SUPERFAMILY PriA/YqbF domain 113 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0554 Amo-Chr1 8157024 8164614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0554 102 247 Core DNA Replication Machinery Family AT3G12530 71.233 1.05e-73 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0554 K10733 - gmx:100780528 381.333