Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0549 ATGGCTGACAGCGGGGAAGAGAAGTTACTTGCTGTGGCGCGCCACATAGCGAAGACGCTGGGGAACGACAATCGAACCGTTGCAGAAGACATACTCAAAATATTCTCAAACTTCGATGCTCGATTCTCCAAGGAGAAGCTTTCTGATCCACTGGGCTGCGCCGCACTGGAACAGACCCTCAACTCACTCGATGAACGCATCTCGCGCCACGTGTCCTCACGCAATAACAACGACAACAGCCAGGCAATCTTTTCCGTCAACACCGCCGCGTTCCTCGCTTCGGTCGACGAGCTCACCGCCACCGTCAACAGATGGAAGCCTCTCGCCGCGGATGAGACCGTAGGCGCGTGCCTCTCACGTGCTGACGAGATGCTCCGTCGGGCTATGGTCTTAGCAGAAGACGAGTTCCGCTCACTCATGGATGAGTCAATTCGGAACACGTCGTTTGACTCGGACGACGGAGGCGAATTTGAAAGAGACGATGAGAGTTGCGGCAACGGCGTTGAGGATCATCGAATTCCAGCGGCAGAACGGGTTTCTGAGGACGATGTGGTGATTGATGTGTTGCCAGCAGGTACGGTGATCGATCTCCGGGAGATAGCGACGCGCATGGTGGCGGCGGGGTTCGGCGACTCGTGCGCGCGCGTGTACGGTGGTTGCCGGAGGGAGTTCTTAGAAGAGAGCTTCTCGAGGTTAGGGTTTCGGAATCTTTGCGCTTCGGAGATTCAGGAGATGCCATGGCAGGTTCTTGAAGACGAGATCGAGCGTTGGATCAACGCCTCCAACGTCTCACTCAGGATCCTTTTCCCCAGCGAGCGCCGGCTGTGCGATCGCGTATTCTCCGGCGGTTCCGCCGCCGATATCGCGTTCGGTGAGGTCTGCCGCGAACCTGTGACACAACTGCTGAGGTTTGCCGACGCCGTCGCGAGTCACAGCCGCTCGCCGGATCAGTTGTTCCGAATCCTCCACGTGTTCGACACAATGCGTGAACTAATTCCTGAATTCGCATCGCTCTTCTCTGATTCACAATGTGAGACTGAAGCAATTGAAGTTTGGAAGCGATTGGGGGAAGCGATCAAGGAAATTTTTGTGGAATTGGAAAACCTGATTCGCCATGATCCGGCAAAGGCGGCAGTTCACGGCGGTGGGCTTCACCCTATCACTAAATATGTAGTGAATTACCTTGTGGCCGCGTCCCAGTCACGGCGAACCTTGGAACTAGTTTTCCAAGGCGATTTTCTTCCATTGAAGGATTTCATCACTATGGTTGATGATAATAAGCATAAATCTGATTCTCATTTTTGTGTTCAATTGTGTGGGATAATGGACTTGTTAGAGAGCAATTTGGAAGCCAAGTCCAAATTCTACAAGGACCTTGCATTGTGCTCTGTTTTCATGATGAATAATTTGAGGTACATTGTTCAGAAGGCGAAAACCAGCGAATTGGGTTCCGTTTTAGGTGATGATTGGATCCGAAAGCACACTGCGAAAATTCGGAGATTTCATGTGAGCTACCAGAGGAGTTCATGGAGCAAGGTGGTGGGGTTCTTGAAGGTTGAGACAAGTGAGGTGACAATGGCAGCAGGGTCTAGTGTCGTTGTTGAGGTAAAGGCTATGAAGGAGAAGCTGAAGATGTTCAACTTGCACTTTGAGGAGATTTGTAGGGTTCAATCTCATTGGGTTGTGTTTGATGAGCAGCTTAGGGAGGAAATCAGAATTGCACTGGAGAAGATCTTGTTGCCTGCCTATGGAAGCTTCATTGGAAGGTTCCATAATGTTCCGGAACTCAGCAAGTACGTTGACAAGTATGTAAAGTATGGGGTGGATGACATTGGAGATCGGCTTAACGATTTGTTTCAGGGAGAAAACAGCGTATTAGAAGTTTCACATCGCTTTAAGATATGGCTATGA 1911 0.5076 MADSGEEKLLAVARHIAKTLGNDNRTVAEDILKIFSNFDARFSKEKLSDPLGCAALEQTLNSLDERISRHVSSRNNNDNSQAIFSVNTAAFLASVDELTATVNRWKPLAADETVGACLSRADEMLRRAMVLAEDEFRSLMDESIRNTSFDSDDGGEFERDDESCGNGVEDHRIPAAERVSEDDVVIDVLPAGTVIDLREIATRMVAAGFGDSCARVYGGCRREFLEESFSRLGFRNLCASEIQEMPWQVLEDEIERWINASNVSLRILFPSERRLCDRVFSGGSAADIAFGEVCREPVTQLLRFADAVASHSRSPDQLFRILHVFDTMRELIPEFASLFSDSQCETEAIEVWKRLGEAIKEIFVELENLIRHDPAKAAVHGGGLHPITKYVVNYLVAASQSRRTLELVFQGDFLPLKDFITMVDDNKHKSDSHFCVQLCGIMDLLESNLEAKSKFYKDLALCSVFMMNNLRYIVQKAKTSELGSVLGDDWIRKHTAKIRRFHVSYQRSSWSKVVGFLKVETSEVTMAAGSSVVVEVKAMKEKLKMFNLHFEEICRVQSHWVVFDEQLREEIRIALEKILLPAYGSFIGRFHNVPELSKYVDKYVKYGVDDIGDRLNDLFQGENSVLEVSHRFKIWL* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0549 636 SUPERFAMILY Cullin repeat-like 80 619 IPR016159 -
Amo01g0549 636 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 620 - -
Amo01g0549 636 Pfam Exo70 exocyst complex subunit 255 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo01g0549 636 Gene3D Exocyst complex component Exo70 67 626 - -
Amo01g0549 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 620 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0549 Amo-Chr1 8079900 8082498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0549 1 624 EXO70 exocyst subunit family AT5G58430 54.799 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0549 K07195 - ahf:112719926 1238.79