Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0547 ATGTTACCTGAGATTGAAACATTGTTCTCTGATGAATGTGGCGGCGTGGCAATAAGGGACGAAGCGATTGGAATCTTGGCAAGGTTGAGGGAAGCAATCAGAAGTGTTTTCGCCGATTTGGAGACTCTGATATGCAAGAATGAAATTTCAGTTGGGATTGTTAATGGTGGAGGGATTCATCCAATCACTTATTATGTAATGAACTACCTTGGTGCTGCTTGTAAATCTTTGATGACATTGGAGCAGGTTTTTGAGAACAATAACAATAATCATGGAGTGGAATTTTATTTGGCTAGGATTTTGTTGTTGTTGGAGCAGAGTTTGAAGGCTAAATCAAAAGAAATGTACAAGGATTCAACTTTAGGGTTAGTTTTCTTGATGAACAATTACACCTACATGGTTAACTGTGTGAAACATAGTAAACTAGGAGAGTTGTTAGGTGAAAATTGGATCAAGAATCACATTGTAGCAAAATTTCGCCAATGTTTTAAAATTTACAAAGCAAATTCATGGGATCAAGTATTCAGAGGGAAGCTTATTAGTGAGTTTGTGTTGAAGTTTGTGGAGATATGTGATGTGCAATCATGTTGGATTATCTTTGATGATCACCTAAGAAGGAAAATTAGAAATAACTTGAAAGAAACATTGTTGGCAAGGTTCAAAAGTGTTATAGAAGGGTCACAAGAAAACATTAATATTTGTGGTGACTTTGGGTTTGGGGTCAGAGATATTGTGGCTGGAATAGACAAGTTGTTTAAGGGAAGAGATGAGCTCAAAAATCACAGAGAGATTCATCCTACATGGACTACAGCCTTGCATGAGCACAATATCAAGGATTTTCATAAACATTGGAAGAAGCATGGCCAGAAAACATTCATTGGTTCTTCATATCCAATGTAA 900 0.3667 MLPEIETLFSDECGGVAIRDEAIGILARLREAIRSVFADLETLICKNEISVGIVNGGGIHPITYYVMNYLGAACKSLMTLEQVFENNNNNHGVEFYLARILLLLEQSLKAKSKEMYKDSTLGLVFLMNNYTYMVNCVKHSKLGELLGENWIKNHIVAKFRQCFKIYKANSWDQVFRGKLISEFVLKFVEICDVQSCWIIFDDHLRRKIRNNLKETLLARFKSVIEGSQENINICGDFGFGVRDIVAGIDKLFKGRDELKNHREIHPTWTTALHEHNIKDFHKHWKKHGQKTFIGSSYPM* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0547 299 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 252 IPR004140 GO:0000145|GO:0006887
Amo01g0547 299 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 1 252 - -
Amo01g0547 299 Pfam Exo70 exocyst complex subunit 1 224 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo01g0547 299 Gene3D Exocyst complex component Exo70 1 262 - -
Amo01g0547 299 SUPERFAMILY Cullin repeat-like 2 224 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0547 Amo-Chr1 8059762 8060910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0547 1 254 EXO70 exocyst subunit family AT5G58430 41.053 2.93e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0547 K07195 - aip:107644445 530.791