Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0544 ATGACTAGGGTTTTCCCAATACATGATCATCACATTCGTCATTCGCGAACATTGATACAAAGCTTGAAACATATCGATGATGATTCTATTGCAACTTCCTTGGCCCTTTCTTGCCAATCAATGCAAGAGTTTCGCGCTGGGGGACTCTTCAATGGCGGTGGCAACAATCATACAGCCTCTACTTTCTCACTTCTAATGTTAGATCTCATTCTTATCATCGTCGTCACTCGCATTCTTCGCATTCTTTTTAAGCCTCTCAAACAACCTGAGCTGGTTTGTCAGATGATGGGTGGTATTATTCTTGGACCTTCTGTTTTGGGACGCCATGGATGGTTTAAACATAATGTAATGCCTGAAGCAGCTGAATTCTTGGTGAAAAATCTTGGAATAATGGGATTCATGTTCTTTGTTTTCATCTATGGTGTGAAGTGTGACCCAACCATGTTGAAAAAATCAGGGAAAATGCATTTGTACACGGCATTAGTTGGTATAAGCATTCCCTCAATGCTAACTTTTCTTGTGTCACTATACATGAGAAAAAACATGGACAAAGAACTTTCTAGAATAGCTTCACTAGGTGTAATTTCAGCGTACTTTGGGATCACAACATTCCCTGTTGTCCATAATATTTTGAAAGAGCTTAACCTTATAAACTCACATGTTGGGAGAATGGCTTTGTCTATGGCTTTAATTGGTGATGCAATTGGTACATGTTCAATTGTAGTATTTGAGGCTGGGAAACATGGAGAAACAGGAACAAAGCATGCAATTTGGTACACAATTTCTCTTGTACTGGTGCTAATGTTCATTATGTTTTGTGTAAGGCCCATGATGATGTGGATTCATAAGAACACTCCAGAAGGGCACCCAGTGGAACAATCTTATGTTGTTGTCATTCTTTTGGGTGTTTTTGTGTTGGGCTTTGTGACAGATATGCTTGGGATGGCAATTGCTAATGGGCCTTTGTGGTTGGGCCTTGTGATCCCTGATGGGCCTCCTTTAGGAGCAACAATAGTGGAAAAGAGCAAGACTATTATGACTGATTTTCTACTACCATTCTCATTCCTTATGGTGGGAACTCATACTGATGTGTTTGCTATGAGTGAGATTGATTGGTCTCATTTAGAACCATTGTTTTTCATGGTTTTAACTGGCTACTTGACCAAATTCTTTTCCACTTGGGTTGCTACATTCTATTGGCAGTTGCCATTTAGAGATGGACTTGCACTTAGCCTTATGATGAGCTTGAGAGGACAAATGGAGCTCATAATGTTTGTCCATTTCATGGATAAGAAGATCATAAAGATACCAGGCTTCACATTATTAGTGCTTATGACAGCAGTTCTAACTGCAACATTCACTCCATTGATCTCCATAGTGTATGATCCAACAAGGCCATATATTGTGAACCAAAGAAGGAACATTCAGCATCACCTTCCAAACACTAAGCTTTCAATGGTTCTATGCATTCAAGATGATGAAAGCATAAATGGTCTCATCAATGTTCTTGACATATCAAATCCAAATCCAAATCGTCCCTTCATAGTTCACACTGTTCGATTATTCGAGCTTGTTGGCCGTGCTAGCCCTCTATTTATAGACCATGACAACCAAGAAATGCCTTCCAATTATCAATGGATGCACATTGTAAATGTTCTAAGGCGCTATCAAGAACTTAAAGGGAAATTTGTGGAGCTAAAGTTTTTCACAGTTGTTTCGCTGAAGCAAATGATGTTCCAAGACATTTGCTTGATTGCTTTAGAAAATGAAGCTTCTCTCATCATCTTACCTTTCAAGAAAAAACATGTTTATAACAAGGGCATGATCCATACTATAAACTCTCAAGTGTTGAATCATGCACCTTGCTCTGTTGGTATTCTTGTTGATAAAGGAAGTAATAATCTTATTGAAATGATGGCTGCAGCAAGAAATATTGCTGCTGCTCCTTCTTCCCTTCGTAGATTCGGACGGCGATATGCTATGCTATTTCTCGGAGGAGCAGATGCAAGAGAGGCTCTTGTTTATGCAGATATGATAGCTGCAAACCAAGATGCTTCTCTTACTGTGATTCGATTCTTGTCCGCAAACTATGTAGGGGACAAAGAAAGGGAGAAGAAGCTAGATGATGGAATTGTGACATGGTTTTGGGTTAAGAATGAGACAAACAACAGAGTGAAGTACAGAGAAGTGGTGGTTAAGAATGGAGAAGAAACAATTGCAAGTATTCTAGCTATGAATAATAATGATAATGATGGTGATGAAGATTATGATCTTTGGATAGTTGGAAGAAAACAAGGGATAAACCCTGTTCTTCTTACAGGGTTATCAGAATGGAGTGAGAGTGAAGAATTAGGACTCATAGGAGATTATATTGCTTCTGAAGATTTTCCAAGTTCTGGTTCTGTTTTAGTTATACATCAACAAATTGTAAGAGGATAA 2439 0.3883 MTRVFPIHDHHIRHSRTLIQSLKHIDDDSIATSLALSCQSMQEFRAGGLFNGGGNNHTASTFSLLMLDLILIIVVTRILRILFKPLKQPELVCQMMGGIILGPSVLGRHGWFKHNVMPEAAEFLVKNLGIMGFMFFVFIYGVKCDPTMLKKSGKMHLYTALVGISIPSMLTFLVSLYMRKNMDKELSRIASLGVISAYFGITTFPVVHNILKELNLINSHVGRMALSMALIGDAIGTCSIVVFEAGKHGETGTKHAIWYTISLVLVLMFIMFCVRPMMMWIHKNTPEGHPVEQSYVVVILLGVFVLGFVTDMLGMAIANGPLWLGLVIPDGPPLGATIVEKSKTIMTDFLLPFSFLMVGTHTDVFAMSEIDWSHLEPLFFMVLTGYLTKFFSTWVATFYWQLPFRDGLALSLMMSLRGQMELIMFVHFMDKKIIKIPGFTLLVLMTAVLTATFTPLISIVYDPTRPYIVNQRRNIQHHLPNTKLSMVLCIQDDESINGLINVLDISNPNPNRPFIVHTVRLFELVGRASPLFIDHDNQEMPSNYQWMHIVNVLRRYQELKGKFVELKFFTVVSLKQMMFQDICLIALENEASLIILPFKKKHVYNKGMIHTINSQVLNHAPCSVGILVDKGSNNLIEMMAAARNIAAAPSSLRRFGRRYAMLFLGGADAREALVYADMIAANQDASLTVIRFLSANYVGDKEREKKLDDGIVTWFWVKNETNNRVKYREVVVKNGEETIASILAMNNNDNDGDEDYDLWIVGRKQGINPVLLTGLSEWSESEELGLIGDYIASEDFPSSGSVLVIHQQIVRG* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0544 812 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 35 811 - -
Amo01g0544 812 PANTHER CATION/H + ANTIPORTER 35 811 - -
Amo01g0544 812 Pfam Sodium/hydrogen exchanger family 70 456 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo01g0544 812 Gene3D - 63 465 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0544 Amo-Chr1 8032904 8036567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0544 1 809 Antiporter Super Family AT5G37060 40.119 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0544 - - ahf:112793168 1519.98