Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0528 ATGTCGAAGGTCGTTTGTGTCACCGGAGCCAGCGGCGCCATCGGATCGTGGCTGGTTAAGCTCCTCCTCCAACGTGGCTACAGCGTCCACGCCTGTGTCCAAGATCTCAAGGATGAGAAGGAGACGAAGCATTTGGAAGGCATGGAAGGAGCGAAGGGTAATTTGGAGTTCTTCGAGATGGATCTTCTAGACAAGGAGTCGATTGCGAAGGCCATAAAGGGATGTGCCGGTGTTTTCCACCTAGCATGTCCCAACATCATAGGACAAGTCCAAGACCCAGAGAAGGAGATATTGGAACCAGCAATTCAAGGGACAGTGAATGTGCTGAAAGCAGCAAAGGAAGAAGGAGTGGAGAGAGTGGTGGCAACATCATCAATCTCTGCCATAACTCCAAGTCCTAATTGGCCAGCTGATAAGATTAAGAATGAAGATTGTTGGACTGATCTTGATTACTGCAAACAGAAGGGGTTATACTATCCTATTGCAAAGACATTGGCTGAGAAAGCAGGGTGGGATTTTGCAAAGGAGACAGGTTTTGATGTGGTTATGATCAATCCTGGCACTGCTTTGGGCCCTCTCATTCCACCAAGAATCAATTCTAGCATGGCTGTTCTTGTTAGTGTCCTTAAAGGTGACAAAGAAACGTACGAGGATTTCTTCATGGGAATGGCACACTTTAAGGACATAGCAATGGCACATATTTTGGCTTTTGAGAACAAGAAAGCATCTGGAAGGCACTTGTGTGTAGAAGCTATTCGTCACTATGGTGATTTTGTTGCCAAGGTTGCTGAGCTTTACCCTGAATACAATGTGGCTAAGTTGCCAAAGGATACCCAACCAGGACTGTTGAGAGCAAAAGATGCATCAAAGAAGCTCATTGATTTAGGGTTAGAGTTCACTCCTATTGATCAAATTATCACTGATGCTGTGGAGAGTTTGAAGAGCCTTGGCTATGTCTAG 960 0.4573 MSKVVCVTGASGAIGSWLVKLLLQRGYSVHACVQDLKDEKETKHLEGMEGAKGNLEFFEMDLLDKESIAKAIKGCAGVFHLACPNIIGQVQDPEKEILEPAIQGTVNVLKAAKEEGVERVVATSSISAITPSPNWPADKIKNEDCWTDLDYCKQKGLYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGPLIPPRINSSMAVLVSVLKGDKETYEDFFMGMAHFKDIAMAHILAFENKKASGRHLCVEAIRHYGDFVAKVAELYPEYNVAKLPKDTQPGLLRAKDASKKLIDLGLEFTPIDQIITDAVESLKSLGYV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0528 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Amo01g0528 319 CDD FR_SDR_e 5 297 - -
Amo01g0528 319 Pfam NAD dependent epimerase/dehydratase family 5 242 IPR001509 -
Amo01g0528 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Amo01g0528 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Amo01g0528 319 Gene3D - 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0528 Amo-Chr1 7895291 7899237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0528 3 319 Monolignol Biosynthesis Gene Families AT5G58490 67.823 1.52e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0528 - - gmx:100806281 563.533