Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0520 ATGGCAAATCATCATAAGAGAACGCTAAAGTTTGACATTAAACAAATTGTTTATGTGAAACCATCAAAACCCACACCAAATGGCAACATTTCACTCTCTGCACTTGATAATAGAGCTGATAACAATGGCCTATGCCATATTGTTCAAATATATCAATCACCGAAAAATGACCAAAATGACCCTGCCCTTATGATCAAAGAAGCACTCTCAAAGGCTTTGTTTTATTACTACCCTTTGGCGGGTAGAATAGTAAAACATGCTGATGGGAAACTTAGAGTTAATTGCAATGCAAATGGAGTTCCCTTTGTAGAAGCCATTGCTAATTGCAACCTTTCTTCTCTCCACTACCTTGATGGTAGTAACACAGAGATTGCAAAACACTTGGTACTTGATCTTCCTTCTGAAGATGAACATGGTTTCCAATTATACCCTTTGTTGATCAAGGTAACCAAGTTTCTATGTGGGGGTTTCACAATTGGCTTAGGAACCTCACATGCTATAATTGATGGCAGTGGAAAATCTCAATTCTTGCAAGCCATAGCCGAATTTGCAAGTGGGAAAACCGAGCCATCGGTGAAGCCTGCATGGGAGAGAGAAAAGCTTGTTGGATCAATTACCAAAATGCCCTTGGAGATTCCTATGGATGAGTCCTCTGCCGCAGTCTCACCTTATTTGCCCACCAAAAAACTTGTTCATGCATGCTTTAAAGTTGACAATGAGAGCATAAAAAGGCTCAAGATGAGTTTGATGAAGGAAGTTATTAGTGACCAAAACAATAACATGGAAGAAAGCTTCACAAGTTTTGAGTCTCTTGCTTCCTATGTTTGGAGGGCAAGAACAAGAGCTTTGAAATTGAACAGTGATGGTAAAGTTATGTTGACTATCATAGTAGGGATAAGAAAGGACCTTCTTGATCCTCCTTTGCCTAAAGGGTATTATGGGAATATTGCTGTGGATGCAAACATTGTGTTGACTGCTAGAGAAGTCAACGAAAGACCACTCTCCCATGTAGCGAAGATCATCAAAGAAACTAAGAAGGTTGCTCAGACAAAGGAGTACGTCAAGAGAATGATCGACACGTCGGCGACGGCGGCCGACGACGATTTCGATTATGATGGAAGGGGTGCGTGCATGGTTTTGACAGACTGGAAACATTTGGGTTTTTCAAAGAACATGGATTTAGGATGGACACAACCGGTGAATTTTGTTCCTGCCCCATGTGGTTTGTTTGATAAATTGCATTTGTGTATTTTCTCATCTCCGAGTAGCTTGGATCCTTCAATGGATGGAGGTGCTAGGATCTTTGTGTCACTCCCCAATGCAGCCATGCCCAAGTTTAGGAACGAGATTGAAGCTCTTATTACGAAACCATAG 1374 0.4112 MANHHKRTLKFDIKQIVYVKPSKPTPNGNISLSALDNRADNNGLCHIVQIYQSPKNDQNDPALMIKEALSKALFYYYPLAGRIVKHADGKLRVNCNANGVPFVEAIANCNLSSLHYLDGSNTEIAKHLVLDLPSEDEHGFQLYPLLIKVTKFLCGGFTIGLGTSHAIIDGSGKSQFLQAIAEFASGKTEPSVKPAWEREKLVGSITKMPLEIPMDESSAAVSPYLPTKKLVHACFKVDNESIKRLKMSLMKEVISDQNNNMEESFTSFESLASYVWRARTRALKLNSDGKVMLTIIVGIRKDLLDPPLPKGYYGNIAVDANIVLTAREVNERPLSHVAKIIKETKKVAQTKEYVKRMIDTSATAADDDFDYDGRGACMVLTDWKHLGFSKNMDLGWTQPVNFVPAPCGLFDKLHLCIFSSPSSLDPSMDGGARIFVSLPNAAMPKFRNEIEALITKP* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0520 457 Pfam Transferase family 13 452 - -
Amo01g0520 457 Gene3D - 6 209 IPR023213 -
Amo01g0520 457 Gene3D - 225 450 IPR023213 -
Amo01g0520 457 PANTHER ACYL TRANSFERASE 4 6 454 - -
Amo01g0520 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0520 Amo-Chr1 7817125 7818695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0520 9 446 Monolignol Biosynthesis Gene Families AT5G48930 27.623 2.30e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0520 K20240 - gmx:100783730 494.197