Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0504 ATGGCTAGTGCAAGAGAGCAAGGTGGTGATGATGGAAAAAACTCCATCACCATACCCCTTCTGGGTGATGAAAAAGCAGAACAGAGAAGCTTCTACAATGGAGATCAGCTACCTAAATCTGCTGATGATTTAGACTCAGTTCATGTTGGTAACACCTCCTTTTTCAAGACCTGCTTCCATGGGATTAATGCAATTTCAGGAATTGGAATTGTTTCAATACCTTATGCACTGGCTTCAGGGGGATGGCTAAGCATATCACTGCTATTTATGATAGCAATTGCTTGCTACTACACTGGCTTATTGGTAAAGAGATGCATGGACATGGACCCTCATATCAGAACCTTCCCTGACATTGGTCAACGTGCTTTTGGAGACAAAGGTAGATTAATGGTCTCCATAGCCATGAATTCAGAGCTCTACCTTGTTGTAACAGGTTACCTCATCTTGGAAGGTGACAACCTTAACAAGCTAATTCCAAACGTTGAAGTAAACCTTGGAGGGCTTGTGATTGGTGGAACAACAATCTTTGCAATACTAGCAACAATTGTGATCTTGCCAACAGTGTTGTTGGAGGATCTTAGCTTGTTGTCTTATGTTTCTGCTAGTGGCGCTTTGGCTTCCACAGTGTTCTTGCTCTCTCTGTTGTGGAATGGAACCATTGATGGGACAGGCTTTCATGGAAAAGGTACAGTTTTCAGGTGGAGTGGCATCCCTGCTGCAGTTAGTTTGTATGCATTTTGCTACAGTGCTCACCCTGTTCTTCCCACACTCTACAATGCCATGAGGAACAAGAATCAGTTCTCAAGTGTCCTATTTGTGTGCTTTCTAGTGTGCACTCTTGGTTATGCAGCAGCAGCAATCCTAGGGTACCTAATGTTTGGTGAAGATGTTGAATCACAGGTTACATTGAACCTTCCAACAGGGAAATTCAGTTCACAAGTTGCAATATACACAACCTTGGTGAATCCAATAGCCAAATATGCATTGATGCTAACCCCAATTGTGAATGCAGTAAAGAACAAGATCTCATGCAACTACAGAAAAAAGAGGCTCACACATGTTATTGTTAGTACCTCATTGCTGATTAGCACTCTTGTTGTGGCAGTGGCAATTCCCTTATTTGGCTACCTAATGTCACTTGTTGGAGCATTGCTAAGTGTCTCTGCATCAATTCTTGTCCCATCCGTCTGTTACTTGAAGATTTCTGGAGCTTACAAGAGATTTGGCTCAGAAATGATCATAAACTATTCAATTATTGTCATGGGTGTTACTATTGCCATTGTAGGCACTTACACTTCTCTTGTAGATATAATTCAAAATTTGTGA 1326 0.4163 MASAREQGGDDGKNSITIPLLGDEKAEQRSFYNGDQLPKSADDLDSVHVGNTSFFKTCFHGINAISGIGIVSIPYALASGGWLSISLLFMIAIACYYTGLLVKRCMDMDPHIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNLNKLIPNVEVNLGGLVIGGTTIFAILATIVILPTVLLEDLSLLSYVSASGALASTVFLLSLLWNGTIDGTGFHGKGTVFRWSGIPAAVSLYAFCYSAHPVLPTLYNAMRNKNQFSSVLFVCFLVCTLGYAAAAILGYLMFGEDVESQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMLTPIVNAVKNKISCNYRKKRLTHVIVSTSLLISTLVVAVAIPLFGYLMSLVGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIVMGVTIAIVGTYTSLVDIIQNL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0504 441 PANTHER OS05G0424000 PROTEIN-RELATED 4 439 - -
Amo01g0504 441 Pfam Transmembrane amino acid transporter protein 51 433 IPR013057 -
Amo01g0504 441 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0504 Amo-Chr1 7525806 7533046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0504 37 438 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.224 1.77e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0504 K15015 - gmx:100784690 660.603