Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0503 ATGACTCCGTTACAGCAATGGCTGCGCATGGTGGTACTTTGCGTGGTGTTCTTGAGCATCAAGAGCCAGTGTTGGACCCTAAAGAACAATCATGATCAAATACAAGTAGAAACAATTCATAGCACATATAACTCATGGCACATTGGACAACATAGGAAGCAACTTCTACAACTACAAGCACCAAAATCTTTTAAAATACACAAACCAAACAAAAGTAACAATAATAATAATAATAAAATCAAAGAAACTACTTCACCATCACCATCATATTTTCCCTCTTCATCATTGTCACCAAATCCTGAAAGTTTCTCACCATCAGAAACTCCTTCAAATTCACCTTCATCTCCACTACCATTATCCCCTGAAGATTCTCATTCCCCTTCACCATCTCCATCCAAATCCAATACCTTTATTCGCAATCTTTCACCTTTACCTTCGCCATTACCGGCCAGTCCACCTAGCGTCGTGTCGAATTGGATTTCAGCGCCATCGCCGGCTCCATTGGCAGCAAACAAAGGGGAATCAAAGAGTTATTCAAGGCAACATTTTGTGATAGTTTGGTCAACAGTTGGTGGATTCTCATTCTTGGTTTTGGTGTCAGCAATTGTTTTTGCTTGCTTCAGAAGTAATAAAGTTGTGACTGTGAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAAAAAGCATTTGTAACAGGTGTTCCAAGTCTGAAAAGAGCAGAACTTGAAGTAGCTTGTGAATATTTCAGCAACATTATTGGTTCTATACCAGATGGAACTGTTTATAAGGGGACACTCTCCAGTGGAGTTGAGATAGCAGTGGCATATTCTTCAGTTACTTCATCTAAAAACTGGTTGAAAAGTATGGAAGCGCAATACCGGAAGAAGATAGAGACATTGTCAAGGGTGAACCACAAGAATTTTTTGAACCTGATTGGATACTGTGAAGAGAGAAAGCCATTCACAAGGGTTATGGTTTTCGAGTATGCTCCGAATGGAACACTATTTGAGCATCTGCATGTCCTAGAAGCAGAACAACTAGACTGGGGAATGAGAGTGAGGATAGCTATGGGAATAGCCTATTGCCTAGAACATTTGCATCAACTGACGCCGGCCGTCGCCCATGGAGACCTGATCTCTTCCTCTATATACCTTACTGAAGACTATGCTGCCAAGTTATCAGACCTTAGTTTCTGGAACAACATAAAAGATTCTGAAGCCATTCAGCTCTCTGAAACAACTTGGACACATATAAAGGACAATGTCTATAGCTTCGGCATGATACTGTTTGAATTGATAACCGGTAGGATTCCTTACGCCGTGGAAAACGGCTTTCGTGTGGATTGGACGGCAGAGTATATAAGGAGGCAGCCCTTGAAAGATATGGTGGATACAAGGCTGAACAATTTGAAAGAAAGTGAAGTTGAGAAATGGTCTCAAGTTATTAAGAGTTGTGTGCATCCAAATGCAGAGAAAAGACCAAATATGAGAGAGGTTGTTGCTAAGCTGAAGGAAATAACTGCTATGGAGCCTGATGGAGCAACTCCAAAATCATCACCACTATGGTGGGCAGAATTAGAAATTATGGATGCGAATTCAGACATTAATCCATGA 1614 0.4126 MTPLQQWLRMVVLCVVFLSIKSQCWTLKNNHDQIQVETIHSTYNSWHIGQHRKQLLQLQAPKSFKIHKPNKSNNNNNNKIKETTSPSPSYFPSSSLSPNPESFSPSETPSNSPSSPLPLSPEDSHSPSPSPSKSNTFIRNLSPLPSPLPASPPSVVSNWISAPSPAPLAANKGESKSYSRQHFVIVWSTVGGFSFLVLVSAIVFACFRSNKVVTVKPWATGLSGQLQKAFVTGVPSLKRAELEVACEYFSNIIGSIPDGTVYKGTLSSGVEIAVAYSSVTSSKNWLKSMEAQYRKKIETLSRVNHKNFLNLIGYCEERKPFTRVMVFEYAPNGTLFEHLHVLEAEQLDWGMRVRIAMGIAYCLEHLHQLTPAVAHGDLISSSIYLTEDYAAKLSDLSFWNNIKDSEAIQLSETTWTHIKDNVYSFGMILFELITGRIPYAVENGFRVDWTAEYIRRQPLKDMVDTRLNNLKESEVEKWSQVIKSCVHPNAEKRPNMREVVAKLKEITAMEPDGATPKSSPLWWAELEIMDANSDINP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0503 537 ProSiteProfiles Protein kinase domain profile. 247 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0503 537 MobiDBLite consensus disorder prediction 66 110 - -
Amo01g0503 537 Pfam Protein tyrosine and serine/threonine kinase 251 503 IPR001245 GO:0004672|GO:0006468
Amo01g0503 537 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 55 531 - -
Amo01g0503 537 MobiDBLite consensus disorder prediction 66 143 - -
Amo01g0503 537 Gene3D Transferase(Phosphotransferase) domain 1 330 516 - -
Amo01g0503 537 MobiDBLite consensus disorder prediction 111 125 - -
Amo01g0503 537 PANTHER PROTEIN MALE DISCOVERER 2 55 531 - -
Amo01g0503 537 MobiDBLite consensus disorder prediction 126 142 - -
Amo01g0503 537 Gene3D Phosphorylase Kinase; domain 1 222 329 - -
Amo01g0503 537 SUPERFAMILY Protein kinase-like (PK-like) 233 503 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0503 Amo-Chr1 7504695 7510146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0503 227 512 Receptor kinase-like Gene Family AT4G31110 32.492 2.09e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Amo01g0503 PK_Tyr_Ser-Thr 4.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0503 - - gmx:100814122 603.979