Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0489 ATGTCGGCAGCGGCTGCGTGTGCAACTGCTGCAGATGCGGCTCGAGCCGCTACATGTCGTGACAGCACAGCCGCAGAACACCTAAAATTCATTTCCATATTCACCATCTTCGTCACCAGCATGGTAGGGATGTCATCCCCGGTGCTGATGACACGTTTCTTTAAAGCTAATCGATCACTCTATGACAAAGCTCTTGTTATTATCAAGTGCTTCGCGGCCGGGGTCATCCTCGCCACCTCATTAGTCCACGTTATGCCTGATGCATTTGACGCGCTAGCTGACTGCCACGTAGCATCCAAGCATCCGTGGAAGGATTTTCCTTTTGCGGGATTTGTGACGTTAGTTGGCGCCATCCTGGCACTCTTGGTTGACGTGGCAGCCAGCTCGCACATGGAGCATCACGTGAGCTATAAGGCTTTGGAGGGAGAAGAGGGGAAGGAGTTAGTTGGAGACAGTTATGACGGTTATGATGACGTGGAGAGGGTTGGGGTGGAAGAGGAAGTGGCGAGATTGAAACAGAGGTTGGTGTCTCAAGTGTTGGAAATTGGGATAATATTTCATTCGGTGATAATTGGAGTGACAATGGGAATGTCTCAGAATGTTTGCACAATAAGGCCACTCGTTGCTGCTTTGGCTTTTCATCAGATCTTTGAAGGAATGGGTCTTGGTGGCTGTGTTGCCCAGGCAGGGTTCAGCTTTGGAACAATGGCATACATGTGCCTCATGTTCTCAGTGACAACACCAATGGGAATAATCTTAGGGATGATTTTGTTCTCAGTGACTGGCTATGATGATAATAACCCTAATGCMTTGATCATGGAAGGGTTACTTGGTTCAGTTTCTTCKGGGATTCTAATTTACATGGCTCTTGTTGATCTCATTGCAGTTGATTTCTTTCACAACAAGCTTATGAACTCAAATAGGAGGTTGAAAAAACTGTCTTTTCTTGCATTAACTCTTGGCTCTGCTTCAATGTCTCTTCTTGCTCTTTGGGCTTAA 999 0.4675 MSAAAACATAADAARAATCRDSTAAEHLKFISIFTIFVTSMVGMSSPVLMTRFFKANRSLYDKALVIIKCFAAGVILATSLVHVMPDAFDALADCHVASKHPWKDFPFAGFVTLVGAILALLVDVAASSHMEHHVSYKALEGEEGKELVGDSYDGYDDVERVGVEEEVARLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTMAYMCLMFSVTTPMGIILGMILFSVTGYDDNNPNALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNRRLKKLSFLALTLGSASMSLLALWA* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0489 332 TIGRFAM zip: ZIP zinc/iron transport family 15 332 IPR004698 GO:0005385|GO:0016021|GO:0071577
Amo01g0489 332 PANTHER ZINC/IRON TRANSPORTER 11 332 - -
Amo01g0489 332 Pfam ZIP Zinc transporter 28 329 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo01g0489 332 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 11 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0489 Amo-Chr1 7272844 7274929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0489 5 332 Inorganic Solute Cotransporters AT2G30080 65.217 2.41e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0489 K14709 - gmx:100797310 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0137 11 1900482 1903256 Amo01g0489 01 7272844 7274929 hybridization
Amo01g0489 01 7272844 7274929 Amo17g0890 17 21510191 21513097 PCT
Amo17g0890 17 21510191 21513097 Amo01g0489 01 7272844 7274929 PCT