Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0487 ATGAACACTTTGAGTCAAATATTCCAAAACATGTTCTCAGACAACAGCAACATAATGCTTGCAGCCATAATATCTTTGCTCCTTGTAATCCTCTTTGTCCTTCTCCTCCATCTCTATGCTAAATGGTTCCTAGCTCAGGCTCAGGCTCAGGCAAATGCTCGCCGCCGTCGTCGTCGCCGCCGCAGAGCAGCCACAGTAACCGTTTCTGATGTTCTTGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATTCACCAATATTCCCATCATCATCAAGTTCTCATCACAATACATCAAAAGGGTTAGATTCTTCTGTCATTGCAAGAATTCCTCTTTTCATTTATACTACTACTAATTCAGAAGCATTGAAAGGTAGTGAAGAAGTTGAGAATAGTGATGAGCTTGAGTGTGTGATTTGTTTGAGTTCTTTTGAAGATGGAGAGATGGGAAGGGCTCCAATAATTCTTAGTAGTGGGATTGTTGTTGAGAATGATAATTCCCAATTAGGTTCTGTTATTGATGATGGGGGTGATCATAATGATCATGATCATGATCATGTTCATGTTCATAATGTTGATGATGGTAGTGGTGCCTCTGCTTTAGTTGAGATTGTGGTTGATGATTTTGGTCAAAGTTCTGAGATTAGAGAGAATAATGAAAATGGAGAAAGAGTGAGTAGTAGCAGTGATTCTTCTGTCTCAGAAACAGAAACCTCAACATCTTTGGTAATTGTTGGTTGTTCTTTGAAGAGAATGTTGAGCAAAGTTTTTCCATCTAACAATGCAAATGTAAATGAATTACAAACTTAG 819 0.3932 MNTLSQIFQNMFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQANARRRRRRRRRAATVTVSDVLGPARFHHFHSFNIEDSPIFPSSSSSHHNTSKGLDSSVIARIPLFIYTTTNSEALKGSEEVENSDELECVICLSSFEDGEMGRAPIILSSGIVVENDNSQLGSVIDDGGDHNDHDHDHVHVHNVDDGSGASALVEIVVDDFGQSSEIRENNENGERVSSSSDSSVSETETSTSLVIVGCSLKRMLSKVFPSNNANVNELQT* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0487 272 PANTHER - 2 266 - -
Amo01g0487 272 MobiDBLite consensus disorder prediction 215 240 - -
Amo01g0487 272 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 266 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0487 Amo-Chr1 7260978 7261880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0487 12 154 Rapid Response to Elicitors AT3G16720 32.168 2.61e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0487 - - adu:107473099 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0487 01 7260978 7261880 Amo07g0952 07 17600718 17601748 PCT
Amo07g0952 07 17600718 17601748 Amo01g0487 01 7260978 7261880 PCT