Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0437 ATGACATACTCATTTCATGAAAAATTAGGACAAGGTAGATATGATGTTGTATGCAAAGCAAGTTTAAATGATGGTCGTCAAGTGACAGTAAAGGTGGTTAAGGAGACAAAAGGAAGTGTGAAAGAATTTGTAAACAAAGTTGTTATTATGAATAAAACATCTCATGTGAACATTATTGTTTCACTTTTGGGATTTTGTTATAAAATGAATAAACAGACACTTATTTATGAATTCATGTCTAATGGTTATATTGAACAAAAAATGTTTAGTCGAATGTGTGGTGGAGTTTCTTACAATTCAAATGTGTACTGTTATAGAATGCTAATTCTTGAAATGATTGGAGAAAAAAGGAATTATAATACTGAAAAATTTCATAGCAGTGAATTGTACTTTTCTAATTGGATTTATAGGAATTTTGAGAAAAGTAATATTTATAAAAGGAGTTTGGTATCAGGAGCAGAAGAAAATGATACAATAATAAAAATTACATTAGTGAGCTTATAG 504 0.2798 MTYSFHEKLGQGRYDVVCKASLNDGRQVTVKVVKETKGSVKEFVNKVVIMNKTSHVNIIVSLLGFCYKMNKQTLIYEFMSNGYIEQKMFSRMCGGVSYNSNVYCYRMLILEMIGEKRNYNTEKFHSSELYFSNWIYRNFEKSNIYKRSLVSGAEENDTIIKITLVSL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0437 167 ProSiteProfiles Protein kinase domain profile. 3 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0437 167 PANTHER TYROSINE KINASE FAMILY PROTEIN 82 167 - -
Amo01g0437 167 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 86 - -
Amo01g0437 167 SUPERFAMILY Protein kinase-like (PK-like) 3 90 IPR011009 -
Amo01g0437 167 Pfam Protein tyrosine and serine/threonine kinase 5 91 IPR001245 GO:0004672|GO:0006468
Amo01g0437 167 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Amo01g0437 167 PANTHER RUST RESISTANCE KINASE LR10-RELATED 82 167 IPR045874 GO:0004672
Amo01g0437 167 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 86 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0437 Amo-Chr1 6616255 6617030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0437 1 86 Receptor kinase-like Gene Family AT1G66980 50.000 6.83e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo01g0437 PK_Tyr_Ser-Thr 4.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0437 - - ming:122064694 127.487