Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0433 ATGCATCCAAATAAATTAATCAAATTGATCATCAATGTGTATAGTTGTAGAAATGTTAAAAAGACCACTTCAATCACACAAGAAGAATATGGTATTATATACAAAGCAAGTTTAAATAATAATCATCAAGTGACAGTAAAAGTACTTAAGGAGTCAAAAGAAAGTGTGAAAGAATTTGTAAACAAGGTTGTTATTATTTGTAGAACATCTCATGTGAACATTATTAAACTTTCGGAATTTTGTTATAAAATGAATAAACAAGCACTTATTTATAAATTCATGTCTAATAATTGGGACACACTATATCAGATCACAATTAGTGTTGCTGGAGTACTAGACTACTTACATCGAGGATGA 357 0.2801 MHPNKLIKLIINVYSCRNVKKTTSITQEEYGIIYKASLNNNHQVTVKVLKESKESVKEFVNKVVIICRTSHVNIIKLSEFCYKMNKQALIYKFMSNNWDTLYQITISVAGVLDYLHRG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0433 118 Pfam Protein tyrosine and serine/threonine kinase 21 96 IPR001245 GO:0004672|GO:0006468
Amo01g0433 118 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 96 - -
Amo01g0433 118 SUPERFAMILY Protein kinase-like (PK-like) 15 116 IPR011009 -
Amo01g0433 118 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 96 IPR045874 GO:0004672
Amo01g0433 118 Gene3D Phosphorylase Kinase; domain 1 25 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0433 Amo-Chr1 6594453 6595389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0433 9 116 Receptor kinase-like Gene Family AT4G18250 36.923 3.05e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo01g0433 PK_Tyr_Ser-Thr 5.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0433 - - aip:107636243 102.834