Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0431 ATGTGTAAAGTGGTAGAAATGTTAGAAGAACCACTTCAATCAAATTGTTTTGATCAACAAGTTGATGAGCTAATTAAAAGTTATGGAGGATATGGAATTGTACATAAAACAAGTTTAAATGATGGTCGTCAAGTGGCCATAAAGGTACTTAAAGAGTCAAAAGGAAGTGTGAAAAAATTTGTAAACGAGGTTGTTACTATTAGTAGAACATTTCATGTGAAAATTGTTTTACTTTTGGGATTTTGTTATGAAATGAATAAACATTCACTCATTCTAAATTCATGTCTAATGAGATCTTTTCATTCGTTTTCTAATTTAGATTGGGGCACACTATATCAGATTACAATTATTAGTGTTGCTCGAGGATTAGACTACATACATTGA 384 0.3021 MCKVVEMLEEPLQSNCFDQQVDELIKSYGGYGIVHKTSLNDGRQVAIKVLKESKGSVKKFVNEVVTISRTFHVKIVLLLGFCYEMNKHSLILNSCLMRSFHSFSNLDWGTLYQITIISVARGLDYIH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0431 127 PANTHER TYROSINE KINASE FAMILY PROTEIN 28 127 - -
Amo01g0431 127 Pfam Protein tyrosine and serine/threonine kinase 29 126 IPR001245 GO:0004672|GO:0006468
Amo01g0431 127 Gene3D Transferase(Phosphotransferase) domain 1 8 127 - -
Amo01g0431 127 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 127 IPR045874 GO:0004672
Amo01g0431 127 SUPERFAMILY Protein kinase-like (PK-like) 28 127 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0431 Amo-Chr1 6593125 6594012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0431 20 127 Receptor kinase-like Gene Family AT1G66980 45.833 4.70e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo01g0431 Pkinase 6.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0431 - - aip:107636243 116.701