Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0428 ATGAAGTGTGGAAGAATTTGTAAACGAGTTTTGGAATTTTGTTATGAAATGAATAAACAAGCACTCAATTCTAAATTCATATTGGAGCACACTATATCAGATCACAATTACTGTTGCTCTCAAGGATTAGACTACTCACATCGAAAATATAATACGAGAATTTTACATCTTGATATTAAACCCCAAAATATTCCTCTTGATGAGAACTTTTGTCCAAAAATTACAGATTTTGGATTAGCTAAAATATACAAAAAGAATGAAAGTATTGTGTCTATGTTGGGTGCAAGAAAGATTCCAGAGTATATTGCCCCAAAAATGATTAGTCAAATTTATGGTGGAGTTTCTCACAAATCGGATATGCACAGTTATAGAATAATTATGATACTGACAAATCTCATGGCAGTGAATTGTACTTTCCTGATTGGATTTATAGGAATTTTGAGAAAAGTAATATTCACACAAGGAGTTTGGTATCAGGAGAATAAGAAAATGATACAATAA 501 0.3074 MKCGRICKRVLEFCYEMNKQALNSKFILEHTISDHNYCCSQGLDYSHRKYNTRILHLDIKPQNIPLDENFCPKITDFGLAKIYKKNESIVSMLGARKIPEYIAPKMISQIYGGVSHKSDMHSYRIIMILTNLMAVNCTFLIGFIGILRKVIFTQGVWYQENKKMIQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0428 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0428 166 Gene3D Transferase(Phosphotransferase) domain 1 20 138 - -
Amo01g0428 166 SUPERFAMILY Protein kinase-like (PK-like) 24 128 IPR011009 -
Amo01g0428 166 PANTHER TYROSINE KINASE FAMILY PROTEIN 39 127 - -
Amo01g0428 166 Pfam Protein kinase domain 11 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0428 166 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 127 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0428 Amo-Chr1 6588124 6588764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0428 10 128 Receptor kinase-like Gene Family AT1G66980 45.588 3.20e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo01g0428 Pkinase 1.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0428 - - aip:107636243 135.191