Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0427 ATGTGTAAAGTGGAAGAAATGTTAGAAGAACCATTTCAATATGTACCTTATCTTCCAAAACCTATCATCTATTCTCCTACAAGACCCCTCTTACAAGGATATGGTATTTTGTACAAAGTAAGTTTAAACGATGGTCATCAAGTGGCAGTAAAGGTACTTAAGGAGTCAAAAGAATATATGAAAGAATTTGTAAATGAGGTTGTTATTATTAGTAGAATATCTTATGTGAACATTGTTTCACTTTTCGAATTTTGTTATGAAATGAATAATAAGGCAATCATTTATGAATTCATGTCTAATGGTTCTTTGGATAAATTTGCATATAAGCAAGGATCTTTTCATCTCATTTCTAATTTAGATTGGGACACACTATATCATATCACAATTAGTGTTGGTCGAGGATTAGACTACTTACATCGATATTTTGAATTAGTTAAAATATACAAAAAGAATAAAAGTATTGTGTCTATGTTGGGTACAAGATGGATTCCAGGTTATATTACACGAGAAATGTTTAGTAGAATGTACGGTGGAATTTCTCACAAAACGGATGTGTAA 558 0.3047 MCKVEEMLEEPFQYVPYLPKPIIYSPTRPLLQGYGILYKVSLNDGHQVAVKVLKESKEYMKEFVNEVVIISRISYVNIVSLFEFCYEMNNKAIIYEFMSNGSLDKFAYKQGSFHLISNLDWDTLYHITISVGRGLDYLHRYFELVKIYKKNKSIVSMLGTRWIPGYITREMFSRMYGGISHKTDV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0427 185 Pfam Protein tyrosine and serine/threonine kinase 42 140 IPR001245 GO:0004672|GO:0006468
Amo01g0427 185 PANTHER RUST RESISTANCE KINASE LR10-RELATED 33 140 IPR045874 GO:0004672
Amo01g0427 185 PANTHER RUST RESISTANCE KINASE LR10-RELATED 142 185 IPR045874 GO:0004672
Amo01g0427 185 PANTHER TYROSINE KINASE FAMILY PROTEIN 33 140 - -
Amo01g0427 185 PANTHER TYROSINE KINASE FAMILY PROTEIN 142 185 - -
Amo01g0427 185 SUPERFAMILY Protein kinase-like (PK-like) 33 175 IPR011009 -
Amo01g0427 185 ProSiteProfiles Protein kinase domain profile. 24 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0427 185 Gene3D Transferase(Phosphotransferase) domain 1 32 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0427 Amo-Chr1 6586960 6588068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0427 33 185 Receptor kinase-like Gene Family AT4G18250 47.253 6.14e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo01g0427 PK_Tyr_Ser-Thr 9.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0427 - - aip:107636243 175.252