Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo01g0372 | ATGAAAACAACATACATGGACCCGCTAAGTTGCTCTGTAGAGGCTGCCAATACATGCACTGCCTCACTCTACCACATAACTCATGATGATTACAGCCTTGAAGAAATTGCATTTTATTACTCTGTTAACTCTTCACAAATCAAGCCTATTAAGTATGGAACAAGGCAAGATTACCTCATAACAGTTCCTTGTTCTTGCAAGAACACACAAAACCTCAGCGGGTATTTCTATCATACAACCTACAAAAATGTGAAGCATGGKGACATCTTTGTGGACATATCAGCTTCTGTTTACAGTGGACAAGCCATGCTGATCACCCAAAGTTTAATTCCAGGCRAAGATCTAGAAATAGACATTCCATGTGGGTGTTCCGAGGATGAGGGTCAAAGGGTTGTCACATATACAGTGCAGCAGAATGATACACCAGAAACAATTTCCCTTTTGCTTAATGCTACCCTGCCTGCCTTSCTGAGAATGAACAAGATTCTAGCTCAGAAACCTGGTTTCATAGATATTGGTTGGGTGCTCTTTGTTCCTTTGGAATTGAATGGGGTTCATGGGGTTCCTCCACAACCCACAGAAAAAACGAAACGGAACTGGCCAATGATAGTTGGTATCGTCGTGGGAGTGCTGTTACTTTCAGTTATCATTATCACCATTCTCATAATTCTTTGGAGAAGGAGAGTCCATCAAATCACCAGAAATGATTCCACAGTTGTCTCTAAAAGATCATTTGTCAACAGAAATATTACCTTGCATAACTCCATCCTTTTCAAAGAATATATGGGAGATGTAATGCAAATTGAATCAGAAAGGCCACTGATATATGGTCTTGAGGAGATAGAAGAGGCTACAAATAACTTTGATGAAGCTCGAAAAATCGGAGTTGGCGGATATGGGAGTGTTTATTTTGGAATCTTAGAGCAGAAGGAGGTTGCTGTGAAAAAGATGAGGTCTAATAAGACTAAGGAATTCTATACGGAACTCAAGGCCTTGTGTAAAATCCATCATATCAACATTGTGGAGCTATTAGGATATGCCAGAGGAGAAGATCACCTCTATTTGGTGTATGAGTATGTTTCAAATGGATCTCTCAGTGAACATATTCATGATCCATTAGAGCAAGGGCACCAACCTCTTTCTTGGAATGCAAGGGTTCATATTGCACTCGATGCAGCAAGAGGTATTGAATACATACATGATCATACAAAAGCTCGATATGTGCATCGCGACATAAAGACTAGCAATATTCTTGTTGATCAGAAGCTCAGAGCTAAGGTAGCAGATTTTGGACTTGCAATGCTGGTGGACAGAAGCAATGATGAAAATTTCATAGCAACAAGGCTTGTTGGAACACCAGGATACCTTCCACCCGAATCTGTGAAGGAGCTTCAGGTGACCCCAAAAACCGATGTGTTTGCATTTGGAGTGGTTCTAGCAGAACTGATAACAGGGAAACGTGCACTGTTTCGGGACAACAACGAAGAAGGCACCAAAATGAAATCACTTATTTCACTTGTACATCAAATATTCCAAGATGCAGAGGCAGAGAATGGTCTAGAAGATGTGATAGATAAGAACCTTGAAGGAAACTATCCCATTGAATACGTGTTGAAGGTAGCAGAGATAGCAGGTCGGTGCTTGCAAGAAGATCCAGTAGAAAGGCCTGAAATGAGGGACTTGGTTGGAGCACTGTCACAGATAGTGATGAACTCCATAGAATGGGAAGCATCACTTGGTGGAAACAGCCAAGTCTTCAGTGGTGTCTTTACTGGAAGATGA | 1782 | 0.4119 | MKTTYMDPLSCSVEAANTCTASLYHITHDDYSLEEIAFYYSVNSSQIKPIKYGTRQDYLITVPCSCKNTQNLSGYFYHTTYKNVKHGDIFVDISASVYSGQAMLITQSLIPGXDLEIDIPCGCSEDEGQRVVTYTVQQNDTPETISLLLNATLPAXLRMNKILAQKPGFIDIGWVLFVPLELNGVHGVPPQPTEKTKRNWPMIVGIVVGVLLLSVIIITILIILWRRRVHQITRNDSTVVSKRSFVNRNITLHNSILFKEYMGDVMQIESERPLIYGLEEIEEATNNFDEARKIGVGGYGSVYFGILEQKEVAVKKMRSNKTKEFYTELKALCKIHHINIVELLGYARGEDHLYLVYEYVSNGSLSEHIHDPLEQGHQPLSWNARVHIALDAARGIEYIHDHTKARYVHRDIKTSNILVDQKLRAKVADFGLAMLVDRSNDENFIATRLVGTPGYLPPESVKELQVTPKTDVFAFGVVLAELITGKRALFRDNNEEGTKMKSLISLVHQIFQDAEAENGLEDVIDKNLEGNYPIEYVLKVAEIAGRCLQEDPVERPEMRDLVGALSQIVMNSIEWEASLGGNSQVFSGVFTGR* | 594 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo01g0372 | 593 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 2 | 593 | IPR044812 | GO:0019199|GO:0045087 | |
Amo01g0372 | 593 | ProSiteProfiles | Protein kinase domain profile. | 288 | 570 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g0372 | 593 | ProSitePatterns | Protein kinases ATP-binding region signature. | 294 | 316 | IPR017441 | GO:0005524 | |
Amo01g0372 | 593 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 359 | - | - | |
Amo01g0372 | 593 | Pfam | Protein kinase domain | 289 | 562 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g0372 | 593 | Gene3D | Transferase(Phosphotransferase) domain 1 | 360 | 579 | - | - | |
Amo01g0372 | 593 | Gene3D | LysM domain | 125 | 184 | IPR036779 | - | |
Amo01g0372 | 593 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 407 | 419 | IPR008271 | GO:0004672|GO:0006468 | |
Amo01g0372 | 593 | PANTHER | LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED | 2 | 593 | - | - | |
Amo01g0372 | 593 | SMART | serkin_6 | 288 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Amo01g0372 | 593 | SUPERFAMILY | Protein kinase-like (PK-like) | 274 | 569 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo01g0372 | Amo-Chr1 | 5844684 | 5847520 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo01g0372 | 262 | 593 | Receptor kinase-like Gene Family | AT1G51940 | 49.852 | 4.19e-113 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Amo01g0372 | Pkinase | 5e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo01g0372 | - | - | gmx:100791718 | 749.969 |