Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0358 ATGGAGAAAGAAGAAGTAGGTGCAAAATGGGTAACACACTATTCAAGTGATCACCAAATACTGTTGGTTGGGGACGGTGATTTCTCCTTCTCTCTTTCACTCGCACGATCCTTCGGTTCTGCTTCCAACATTGTRGCTTCTTCTCTTGATTCCTATGATGATGTTACCAAGAACTACAAGCAAGCGAAATCGAATTTAGACGAACTAAAACAGCTAGGAGCGTGCTTGTATTACGGAGTGGATGCAACCAAGATGAAGTATCTTCTGGAATTGAAGATGCGCAGGTTTGATCGCATTATATTCAACTTTCCTCATGCAGGTTTCCATGGAAAGGAAGACAACTTGACAGTGATTMAGAAGCATAAAGATCTTGTKCTTGGTTTCTTCAAGAATGCAAGTTGCATGCTTAGTGCTAATGGTGAAATTCATGTGAATCATAAGACTAGTCCTCCTTTCAGCAACTGGGAGATAGAGAAGCTTGGTGAACAAAGCTTATTGACATTGATCGAGCTTGCYGACTTCAGGAAAGAAGATTACCCTGGTTATAACAACAAGCGAGGCGATAGTGGTAGATGCGATGAACCYTTTCCACTCGGAATGTGCAGCACTTACAAGTTTATTAGAGCTACAATGAGGAAGTGCGAGAGGAAAAGGAAAAGGGGTTCAGGAGAGCAAATATGTCGCCCATATCTAGAAATACAAGATGCTAGGCAGCAATTACCAACTACTTCAGTTGATCTCAATTGTTATTCTCAATCAAGTGAGGTTTCGAAATTCCCGCGAATTGTGTCATCAGACTCATCACTCTATGGTTTGTCAAATGAACATGCTTCAATCAGATGTGGCTACCTGAACAATGTCGATGCAACACACCATAGAGCTGCTCATTGTGCTGCCTACTATTATGGTCAGGGTATGAGACAGAGCTCTCAGAGATTGTTGCAGCCTTTGCAACCAATGAAGCCATTGAATCCTTTCCAACTTTGGCCAACATCAACTAATGTTAGATATTCTCAAACATATTATGTTAGAACAATGGATATCACTCGACTGCCACTTGTTGCTAGAAATGAAGGCTACCAGGTCTATAGTGGCAGTTCAAATTATATGGGAGAAGCAGTTGGTGGAACAGTTCAAAGGTATCACTATGAAAGAGTAGAGAGACCTGAATTCCAGAGCCATATCTCTCAGTTGTATTGGAGAGAAGTTGTCAATGGTGGCAACTATGTTCATAGTGTCATTCCCAGGATGAGTGTGATAGAAGAGAGGAATATGATGTTTATTAGGTCCTGA 1293 0.4122 MEKEEVGAKWVTHYSSDHQILLVGDGDFSFSLSLARSFGSASNIVASSLDSYDDVTKNYKQAKSNLDELKQLGACLYYGVDATKMKYLLELKMRRFDRIIFNFPHAGFHGKEDNLTVIXKHKDLVLGFFKNASCMLSANGEIHVNHKTSPPFSNWEIEKLGEQSLLTLIELADFRKEDYPGYNNKRGDSGRCDEPFPLGMCSTYKFIRATMRKCERKRKRGSGEQICRPYLEIQDARQQLPTTSVDLNCYSQSSEVSKFPRIVSSDSSLYGLSNEHASIRCGYLNNVDATHHRAAHCAAYYYGQGMRQSSQRLLQPLQPMKPLNPFQLWPTSTNVRYSQTYYVRTMDITRLPLVARNEGYQVYSGSSNYMGEAVGGTVQRYHYERVERPEFQSHISQLYWREVVNGGNYVHSVIPRMSVIEERNMMFIRS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0358 430 Coils Coil 52 72 - -
Amo01g0358 430 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 21 186 IPR019446 GO:0070042|GO:0070475
Amo01g0358 430 PANTHER PHENYLALANYL-TRNA SYNTHETASE 9 210 - -
Amo01g0358 430 PANTHER BNAC06G26310D PROTEIN 9 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0358 Amo-Chr1 5598118 5601435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0358 - - gmx:100802899 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0297 11 4520545 4523866 Amo01g0358 01 5598118 5601435 hybridization