Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0351 ATGCCACAAGAGAGCTTCCATAATCCATTTTTCACTTCTCCTTCAAAGAGAGGATTGAAGGGTTTGGTTCCTAACAACAACAACAATAATAATAATGAAGCTTCTTCAAAGAATGCCATAGCAATAATAGAGGAAAGTTTCAATGATCATGAATTGGCTCAAAGAAAGGCAGAGGAAGCAGCTTCAAGGAGAAACCAAGCATCAGAATGGGTTCGAGAAATGGATGAAGCAGCAAAAGCATTGCTCCCAAAAGAACCTTCAGAAGAAGAATTCCGCAATGCGCTTCGGAATGGACTCATTCTTTGCAATGTCCTCAACAAAGTCCACCCTCGTGCTGTTTACAAAGTGGTGGAGAATGGTGGGGTTGCGGTCCCAAGCGCAGAGGGCGCAGCACACTCTGCAATTCAATATTTTGAGAATGTCAGAAACTTTTTGGAGGCTGTCAGAGATATGCAGCTTCTCACTTTTGAAGCTTCTGATTTGGAGAAGGGTGGTTCATCAAACAAAGTAGTAGACTGCATTCTATGTTTGAAAGGGTACCATGAATGGAAGTTATCCGGTGGAGAGGGAGTATGGAAGTATGGTGGGACTGTGAGAATTACTTCATTTCCAAAGAGRTCTTCTCCTTCTTCATTATCCACAAWTGGAAGTGATCAAAGTAGTGGTGATGATCAATCATTGTTGGATGAACAAATAGAGGCATCACAATATGAACACTTGTTAGAGTTTCTTCARCTTTCTCAAGAGTTGTTGATTCAAGAAGCAAGAACTGCAAACACTCTCTCTTTCCTTTTTGATCACTTTGGACTCAGGCTTCTTCAGGCATACCTTAGAGAAACTGATCACATTCAAGATCTGCCTTTCAATGCAATGGTAATTGATACCCTTCTTAGCAAGGTAGTCAAAGATTTCTCATCCTTGCTTACTTCCCAAGGCACTCAGCTTGGACTTTTCCTGAAGAAGATACTGAAAGGTGATATTGGGTGCCTATCAAAGAGAGAGTTCATAGAAGCTATCTCACTATATCTTAATCAAAGAAGTAATTTGGCATCAAATGATTTCTCCAAATTCTGCATTTGTGGTGGTAAACGTGAAAATATTCGGCATAACAACAATAATAATGGCAATTATTCCTCCAAGCATATTGAAGTAATCAATAACCAACAGAAGCAACTTGAGGAAATGAAATACTTTTTTGAAGAGACAAAAATGGAGGTCAAACAAATTCAGTCAGAATGGGAGCAAGAAAGTAGTAGGCTAGAGGAACATATCAAGAGTCTTGAAGTGGCCTCCTCTTCCTATCAGAAAGTTTTGGAGGAGAATCGTAATCTTTATAATCAAATACAAGACCTCAAAGGAACCATTAGGGTGTATTGTAGAGTGAGGCCATTCTTACAAGGACAATCAAATGGAGAGTGTACAGTAGATTATATTGGAGAAAATGGAGACATGATGATTGTGAACCCCCTTAAGCAAGGCAAAGATTCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAACCATAACACAAGAGCAAATATATGGTGACACTCAACCACTAGTGAGGTCTGTTTTAGATGGTTATAATGTGTGCATATTTGCATATGGACAGACTGGCTCAGGAAAGACCTATACAATGAGTGGTCCTGATCTGACAAATGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTGATATATCGAAGGAAAGAACAAATGCCATAAAATATGAAGTTTATGTTCAGATGATTGAGATATACAATGAACAAGTCAGAGACTTGTTAGTCATTGATGCCTCTAATAGAAGATTAGATATACGAAACAACTCTCAACTAAATGGTCTAAATGTCCCCGATGCATTCATAGTTCCAGTCACTTGTACCCAAGATGTTCTTGACTTGATGAGAATCGGTCAGAAAAATCGCGCCGTGGGTGCTACTGCGCTAAATGTTCGAAGCAGCCGTTCTCACAGTGTTCTAACCGTTCATGTTAGAGGGGTGGAAGTGGTTTCGAATTCGATTCTTCGGGGTTGTCTCCACCTAGTTGATCTGGCCGGAAGTGAAAGAGTTGATAAATCTGAAGCTGTTGGTGAAAGACTAAAAGAGGCTCAATATATAAATAGGTCACTCTCTGCACTTGGAGATGTTATCTCTGCTCTTGCACAAAAAAGTCCTCATATTCCTTATAGAAATAGCAAGCTCACACAAGTCTTACAAGATTCTTTAGGTTATAAGAATGGGAACAATGGAAGAATGGGAACAACTCTAGAAATGCCATTGAATCACAGAAAGGAAGAGCTATTTCACCTTATCGCTTGCCCAAATATGGAAACACTAGTGCCACCATGA 2364 0.3955 MPQESFHNPFFTSPSKRGLKGLVPNNNNNNNNEASSKNAIAIIEESFNDHELAQRKAEEAASRRNQASEWVREMDEAAKALLPKEPSEEEFRNALRNGLILCNVLNKVHPRAVYKVVENGGVAVPSAEGAAHSAIQYFENVRNFLEAVRDMQLLTFEASDLEKGGSSNKVVDCILCLKGYHEWKLSGGEGVWKYGGTVRITSFPKRSSPSSLSTXGSDQSSGDDQSLLDEQIEASQYEHLLEFLQLSQELLIQEARTANTLSFLFDHFGLRLLQAYLRETDHIQDLPFNAMVIDTLLSKVVKDFSSLLTSQGTQLGLFLKKILKGDIGCLSKREFIEAISLYLNQRSNLASNDFSKFCICGGKRENIRHNNNNNGNYSSKHIEVINNQQKQLEEMKYFFEETKMEVKQIQSEWEQESSRLEEHIKSLEVASSSYQKVLEENRNLYNQIQDLKGTIRVYCRVRPFLQGQSNGECTVDYIGENGDMMIVNPLKQGKDSRRVFSFNKVFGTTITQEQIYGDTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLTNEETWGVNYRALRDLFDISKERTNAIKYEVYVQMIEIYNEQVRDLLVIDASNRRLDIRNNSQLNGLNVPDAFIVPVTCTQDVLDLMRIGQKNRAVGATALNVRSSRSHSVLTVHVRGVEVVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQYINRSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGYKNGNNGRMGTTLEMPLNHRKEELFHLIACPNMETLVPP* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0351 787 MobiDBLite consensus disorder prediction 19 37 - -
Amo01g0351 787 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 30 748 - -
Amo01g0351 787 ProSiteProfiles Calponin homology (CH) domain profile. 61 182 IPR001715 GO:0005515
Amo01g0351 787 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 749 IPR027417 -
Amo01g0351 787 MobiDBLite consensus disorder prediction 1 37 - -
Amo01g0351 787 PRINTS Kinesin heavy chain signature 683 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 PRINTS Kinesin heavy chain signature 732 753 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 PRINTS Kinesin heavy chain signature 529 550 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 PRINTS Kinesin heavy chain signature 652 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 SUPERFAMILY Calponin-homology domain, CH-domain 58 202 IPR036872 -
Amo01g0351 787 Coils Coil 434 454 - -
Amo01g0351 787 SMART ch_5 63 180 IPR001715 GO:0005515
Amo01g0351 787 Coils Coil 410 430 - -
Amo01g0351 787 Pfam Kinesin motor domain 460 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 Gene3D Kinesin motor domain 396 760 IPR036961 -
Amo01g0351 787 MobiDBLite consensus disorder prediction 205 225 - -
Amo01g0351 787 ProSiteProfiles Kinesin motor domain profile. 454 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 SMART kinesin_4 452 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo01g0351 787 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 748 - -
Amo01g0351 787 Pfam Calponin homology (CH) domain 63 182 IPR001715 GO:0005515
Amo01g0351 787 Gene3D - 47 197 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0351 Amo-Chr1 5500358 5511804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0351 384 748 Calmodulin-binding Proteins AT5G65930 38.251 1.17e-67 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0351 K10406 - gmx:100786466 1138.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0351 01 5500358 5511804 Amo07g0211 07 1958252 1964861 PCT
Amo07g0211 07 1958252 1964861 Amo01g0351 01 5500358 5511804 PCT