Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0350 ATGCCTGAAAGCTTAAGGAATCTTTCACTTTCTCCCAAAATCTTCTTCTTCACCTTGCTTCTTTCATTAAACATCATTCTCCTCTTTCCATGTTGTTGTTTCTCACTTAATGAACAAGGCCAAGCTCTTTTATCATGGAAGAACAGTTTAAACAGCACTTCAGATTCATTAGCATCATGGAACAATTCTACTTCAACACCATGCAACTTTTTTGGTGTTCGTTGCAACTCACAAGGGGATGTTGTCCAAATAAATTTGAAATCAGTGAACTTGGAAGGTTCATTGGTACCTTCAAATTTTCAACCATTAAGGTCAYTGAAGATTCTTATCCTCTCATCAACAAACATCACAGGAAGGATCCCAAAGGAGATTGGAGACTACCAAGAACTCATGTTTCTTGATCTTAGTGGCAATTCTCTRTTTGGYGAAATCCCAGAAGAGATTTRTAGGCTAAGAAAACTAGTTAGTTTGTCCCTTCACAGAAACTCACTTGAAGGAAACATTCCATTCAGCATTGGGAATCTATCAAGCCTTGTGAACTTGACACTCTATGATAATCATCTCAGTGGTGTGATTCCAAAGAGCATTGGATCCTTAAACAAGCTTCAAGTGTTTAGAGCTGGTGGCAACAAGAATCTTAAGGGTGAGCTTCCATGGGAGATTGGAAACTGCACCAACTTGGTCATGTTAGGTCTTACAGAAACCAGCATTTCTGGGAGAATCCCTTCATCAATTGGAATGCTGAAAAGGATTCAAACCATGGCAATTTACACAACACTATTGTCAGGTCCTATTCCAGAAGAGATTGGCAAYTGCAGTGAGTTGCAGAACATTTACTTGTACCAGAACTCTCTCTCAGATTCAATCCCAAACCAAATTGGAGAACTCAGCAAGCTTCAGAATCTTCTTTTATGGCAGAACAACATAGTTGGTASAATCCCAGAAGACCTTGGAAGATGCAGAGAGATCAAGGTCATAGATTTCTCCGAAAACCTTCTGACAGGTAACATTCCAAGGAGTTTTGGTCAGCTTTCTAATCTTGAAGAGCTTCAGCTTAGTGTCAACCAGGTCTCAGGCTCCATACCTCCTGAAATCTCAAACTGCACCTCTCTGGTTCAGCTGCAGCTCGACAACAACGCTCTCTCCGGCGAGATTCCGGCACGCATCGGCGACTTGAGAAGCCTAACTCTGTTCTATGCTTGGCAGAACAATCTAACAGGAAAACTCCCAGATAGTCTTTCTGAGTGCCAAGAACTTGAGGCACTTGATCTTTCATACAACAATTTGATAGGTCCAATTCCAAACCAACTATTCGAATTGAAAAATCTCACCAAACTCTTGCTTCTTGCMAATGATTTATCCGGCGTTATYCCGCCGGATATAGGTAACTGCACTAGCCTATACCGGCTCCGGTTGAATCACAATAGACTAGCAGGTAACATTCCACAAAAGATTGGAAACTTAAAAAATCTGAATTTCTTGGATTTGAGCAACAACCATCTCASTGGGGACTTTCCTCAAACACTTGGTGGGTGCCAGAACCTTGAGTTCTTGGATCTTCATTCAAACAGCATCACAGGTTCTGTTCCTGATTCTCTTCCCAAAAGCCTTCAATTAATTGACATATCAGATAACATGCTTTCAGGATCATTGACTCATTCCATTGGTTCACTGAATGAATTAACAAAACTCTACCTTGGAAAGAACCAAATCAATGGAAGAATACCTTCAGAGATTCTCTCTTGTTCCAAGCTACAACTTCTTGATCTAGGAAGCAACAGTTTCTCAGGGGAAATCCCAAAAGAACTTGGCCTACTTTCTTCGCTCGAAATCTCGCTGAATCTCAGCCATAACCGACTCTCCGGCGAGATTCCGACCGAGTTTTCGAGCCTGGGAAAGCTAGGAGTACTTGATCTCTCACACAACAATCTCACAGGGAACTTAGATGCTCTTTCTAGCCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATGGCTTCTCTGGTGAATTACCAAACACACCATTCTTCCATAAGCTCCCTCTCAGTGATCTCGCCGAAAATCAAGGTCTCTATATTTCTGGAACTGCTATAAACTCTTCTTTGAAAACAGAGTCAAAGAGTCACAAAAAATCAGTTATGAAGTTTGTTATGTCAATTCTCCTTAGCACCAGTACTGCACTGGTGCTCCTAACGGTCTGCGTCCTGATTCGTTCACGATTGAACGAATCACGGACGCAGGCCGATAGCTGGGAATTGACATTATATCAAAAATTTGAACTATCCATTGATGAAATTGTCTTGAATTTGACCTCATCGAATGTGATTGGAACCGGAAGCTCTGGAGTGGTGTACAAGGTATTGATTCCCAACGGCGAAATACTAGCCGTTAAGAAGATGTGGTTGTCCACGTCATCGGAAGAATCTAGAGCATTTGATAACGAGATTCGAACACTTGGATCAATTAGGCACAAGAATATCATAAGGCTCCTTGGTTGGGGATCCAACAGGAACTTGAAACTCCTTTTCTATGATTATCTCCCTAATGGAAGTTTGAGTTCTTTGCTTCATGGTTCAGGGAAGGGAAAAGCTGAATGGGAAACAAGATATGATGTTGTGTTGGGTGTAGCTCATGCACTTTCATATTTGCACCATGATTGTGTTCCTTCTATAATCCATGGAGATGTTAAGGCCATGAATGTCTTGTTAGGACCTGGATTTCAACCTTACCTTGCTGATTTTGGGCTTGCAAGAATTGCTACTGATACTGAAAATTCTATGCAAGTACAAAGACACTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAACCAATAACTGAAAAGAGTGATGTATACAGTTTCGGAATGGTTCTACTTGAGGTTCTAACAGGAAGGCACCCATTAGACCCAACCCTACCAATGGGTGCACCCTTGGTYCAATGGGTTAGGAACCACTTAGCCAACAAAGGTGACCCATCAGACATCCTTGACTCAAAGCTCAAAGGGAGATCTGACCCTACCATGCATGAGATGMTACAAACTTTGGCAGTGTCATTTCTRTGTGTTAGCACAAGAGCAAATGATAGGCCAACAATGAAGGATGTTGTTGCAATGTTAAAGGAAATTAGGCCTATTGAAACATCAAGGCCTGATTATGATGTGCTGAAGAATAAAGGAGGTTTGAGCTTAGCATCACATAGTTCTTCACCAATTAGACCACCATCACCATCACCATCACCATCACCATCACCATCACTACCTCCTAGGAATGCTGTTGTTTCTCATGGATCTTCTAATTGTTCCTATAATTTCTCTGATGAGTCAAACAGTTAA 3351 0.4127 MPESLRNLSLSPKIFFFTLLLSLNIILLFPCCCFSLNEQGQALLSWKNSLNSTSDSLASWNNSTSTPCNFFGVRCNSQGDVVQINLKSVNLEGSLVPSNFQPLRSLKILILSSTNITGRIPKEIGDYQELMFLDLSGNSLFGEIPEEIXRLRKLVSLSLHRNSLEGNIPFSIGNLSSLVNLTLYDNHLSGVIPKSIGSLNKLQVFRAGGNKNLKGELPWEIGNCTNLVMLGLTETSISGRIPSSIGMLKRIQTMAIYTTLLSGPIPEEIGNCSELQNIYLYQNSLSDSIPNQIGELSKLQNLLLWQNNIVGXIPEDLGRCREIKVIDFSENLLTGNIPRSFGQLSNLEELQLSVNQVSGSIPPEISNCTSLVQLQLDNNALSGEIPARIGDLRSLTLFYAWQNNLTGKLPDSLSECQELEALDLSYNNLIGPIPNQLFELKNLTKLLLLANDLSGVIPPDIGNCTSLYRLRLNHNRLAGNIPQKIGNLKNLNFLDLSNNHLXGDFPQTLGGCQNLEFLDLHSNSITGSVPDSLPKSLQLIDISDNMLSGSLTHSIGSLNELTKLYLGKNQINGRIPSEILSCSKLQLLDLGSNSFSGEIPKELGLLSSLEISLNLSHNRLSGEIPTEFSSLGKLGVLDLSHNNLTGNLDALSSLQNLVSLNVSFNGFSGELPNTPFFHKLPLSDLAENQGLYISGTAINSSLKTESKSHKKSVMKFVMSILLSTSTALVLLTVCVLIRSRLNESRTQADSWELTLYQKFELSIDEIVLNLTSSNVIGTGSSGVVYKVLIPNGEILAVKKMWLSTSSEESRAFDNEIRTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVVLGVAHALSYLHHDCVPSIIHGDVKAMNVLLGPGFQPYLADFGLARIATDTENSMQVQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPMGAPLVQWVRNHLANKGDPSDILDSKLKGRSDPTMHEMXQTLAVSFLCVSTRANDRPTMKDVVAMLKEIRPIETSRPDYDVLKNKGGLSLASHSSSPIRPPSPSPSPSPSPSLPPRNAVVSHGSSNCSYNFSDESNS* 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0350 1116 MobiDBLite consensus disorder prediction 1077 1093 - -
Amo01g0350 1116 Gene3D Ribonuclease Inhibitor 436 533 IPR032675 -
Amo01g0350 1116 Pfam Leucine rich repeat 298 356 IPR001611 GO:0005515
Amo01g0350 1116 Pfam Leucine rich repeat 466 525 IPR001611 GO:0005515
Amo01g0350 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Amo01g0350 1116 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1061 - -
Amo01g0350 1116 MobiDBLite consensus disorder prediction 1056 1116 - -
Amo01g0350 1116 SMART LRR_typ_2 488 512 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 103 127 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 440 464 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 344 368 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 151 175 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 606 630 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 558 582 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 631 654 IPR003591 -
Amo01g0350 1116 SMART LRR_typ_2 296 320 IPR003591 -
Amo01g0350 1116 Gene3D Ribonuclease Inhibitor 534 611 IPR032675 -
Amo01g0350 1116 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Amo01g0350 1116 Gene3D Ribonuclease Inhibitor 612 700 IPR032675 -
Amo01g0350 1116 SUPERFAMILY RNI-like 326 670 - -
Amo01g0350 1116 Gene3D Ribonuclease Inhibitor 194 435 IPR032675 -
Amo01g0350 1116 SUPERFAMILY RNI-like 84 406 - -
Amo01g0350 1116 Gene3D Phosphorylase Kinase; domain 1 735 846 - -
Amo01g0350 1116 MobiDBLite consensus disorder prediction 1094 1116 - -
Amo01g0350 1116 ProSitePatterns Protein kinases ATP-binding region signature. 776 799 IPR017441 GO:0005524
Amo01g0350 1116 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Amo01g0350 1116 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Amo01g0350 1116 Gene3D Transferase(Phosphotransferase) domain 1 847 1062 - -
Amo01g0350 1116 Pfam Protein kinase domain 773 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0350 1116 SMART serkin_6 770 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0350 1116 SUPERFAMILY Protein kinase-like (PK-like) 768 1045 IPR011009 -
Amo01g0350 1116 ProSiteProfiles Protein kinase domain profile. 770 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g0350 1116 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0350 Amo-Chr1 5490448 5494658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0350 33 1114 Receptor kinase-like Gene Family AT5G56040 63.978 0.0 1366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo01g0350 Pkinase 4.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0350 - - gmx:100802880 1660.2