Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0299 ATGGAAGTTCAGATTTATCACTTGCTAGCCCTTTTTTCTTTGTTCCTCTCCATCATTGCGGCACTCAAACAAAACAATGCCAAGAAAACCGACAAAATTCCAAATATACCCCCATCACCATGGAAGCTACCTATCATAGGAAACATGCTCAACCTTGTTGGTTCTGCACCACATAGAAAACTAAGAGACTTAGCACAAAAATATGGACCTTTAATGCATCTTCAACTTGGTGAAATCTTTTTCGTTGTGGTTTCTTCACCAGCTTATGCTAGAGAGATACTAAAAATCCATGATGCGAATTTCGCATCACGGCCGTACTCTCTAGCATCAGATGTGGTGTTCTATGGTTCCACGAACATAGCATTTTCGCCATATGGCGAATACTGGAGACTGCTACGCAAGATATGTACTACGGAAATTTTAAGCGCGAAACGCGTTCAATCACAGTTGCCAATGAAACTGAAAGAAGTCAACAACCTCATCAAAGGGATTGCTTCTGAGGAAGGATCCGTTATCAATCTTAGTCAAAAAATTATATCATTGATGTTTTCTATTACTTCTATGGCCGCGTTTGGCAAGAAGTACTATGAACAAGAAGAGTTCATTAAAGTTGTTAGAGAGGTTTTGAAGCTGGCTGGAGGTTTTTACATTGGAGACTTGTTTCCATCGGCTAAATGGATTCAGAACCTCACTGGGATGAGGCCTAAGCTTGAGGATTTGCATTGGAGAGTTGATAGGATACTACAGATCATCATCGATGATCATAGACAATCAAGAACTGATAAAGAAGTGGAGGATCTTGTTGATGTTCTGTTGAAATTTGAGGGGAATAGTAGTGATGTGGATCTTCCCTTAACCAACAACAATATCAAGGCGATAATCTTTGATGTCTTCACCGGCGGAAGTGACACAGCAGCAACTACCATTAACTGGGCGATGGCTGAGATGATGAAGAATCCAAAAATACTGAAGAAAGCGGAATCCGAAGTGAGAGAGGTATTAGATACAAGAGTAGGACCGAAGTTTATTGATGAAACTTGCATTGAAGAAATGAAATACTTGAAAGCAGTTATCAAAGAGACTTTGAGATTACACCCTGCCGGTCCCCTTTTGCTTCCACGGGAATGCGGACAAGCTTGCGAAATCAATGGATATCACATACCAACCAAAAGCAAGATCGTAATCAATGCATGGGCCATTGCAACGGATCCTAACTACTGGACTGAACCGGAGAGGTTTTTTCCTGAGAGGTTTATTGATAGCTCAATTGATTTCAAAGGTAACAATTTTGAGTTCATTCCGTTTGGTGCTGGACGAAGAATTTGCCCCGGAATGAACTATGGTGTTGCAAGTGTTGAGTTAATCCTTGCATTGCTGTTGTATCACTTTGATTGGAAGCTTCCTAGTGGGATTAAAAGTGAGGATTTCGATATGTCTGAGTTATTTGGAGCATCTGTTGTGAAAAAATCTGACTTGTTCTTGATTCCTGTGGTTTCTCGTTCT 1503 0.4059 MEVQIYHLLALFSLFLSIIAALKQNNAKKTDKIPNIPPSPWKLPIIGNMLNLVGSAPHRKLRDLAQKYGPLMHLQLGEIFFVVVSSPAYAREILKIHDANFASRPYSLASDVVFYGSTNIAFSPYGEYWRLLRKICTTEILSAKRVQSQLPMKLKEVNNLIKGIASEEGSVINLSQKIISLMFSITSMAAFGKKYYEQEEFIKVVREVLKLAGGFYIGDLFPSAKWIQNLTGMRPKLEDLHWRVDRILQIIIDDHRQSRTDKEVEDLVDVLLKFEGNSSDVDLPLTNNNIKAIIFDVFTGGSDTAATTINWAMAEMMKNPKILKKAESEVREVLDTRVGPKFIDETCIEEMKYLKAVIKETLRLHPAGPLLLPRECGQACEINGYHIPTKSKIVINAWAIATDPNYWTEPERFFPERFIDSSIDFKGNNFEFIPFGAGRRICPGMNYGVASVELILALLLYHFDWKLPSGIKSEDFDMSELFGASVVKKSDLFLIPVVSRS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0299 501 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 499 - -
Amo01g0299 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Amo01g0299 501 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g0299 501 PANTHER CYTOCHROME P450 71B11-RELATED 9 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0299 Amo-Chr1 4844465 4847252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0299 8 501 Cytochrome P450 AT3G26310 41.833 1.77e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0299 - - mtr:MTR_3g058060 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0371 11 5979649 5982593 Amo01g0299 01 4844465 4847252 hybridization