Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g0293 GACCTGTTAAAGAATTATTTACCTATATTTATCTATGAAACCATTACCGTTGTTTTTAGCTCGCGTTTGGTATACTACCTCCTCAGACCCTTAAGTCAGCCTCATCTCGTTTCTGATCTTCTTGCAGGTATGTTGCTAAGTTCAATATTTCAATTGGGAGGGAGTAATAAGTTATTTCAAGATTTTCTCCCTATACAGATTCTACTTGCTGTTTCAACCATAGCACAAGTGGGTCTCATCTTCTATGTCTTCATGGCTGGGCTTGAGATGAACTTAGATTTTGTTTTAAGAGCACCTAAAAAGCCCACAATCATTGCAATTTGCAGCACTCTGATTCCAATGATATTGGGAACTGGAATTTATTCTTTGGTAATAATAGTGGACAAGAAATTCTTAAAAAATTATGTTGAAACATATGAGTATAATAGACCCCAATGCTATTTTATATGGTCTATGGTTCTTAGTATCACAGGGTTCCCTGTTCTTGCAAACATTCTTGTGGACCTTAAACTTCTCTACACTAGGCTTGGAAAATTGGCATTAACAGTAGCAACACACAATGACTTCTATAACTGGATTATGTTTGCATTGGTGTTTCCATTTCTTGTTAATGGTTATAGAGCAATTTTCTCAATGCTATGTGTCATAGCTTTTATTCTCTTAAGCCACTTTGTGTTACGCCCTTTGCTAGAGAAGATAGTGGCCAAGAAACCAAACAAGCATGACTGGACTAATTACCAGTTGTCATTTGTGATCATGGGGCTTTTCGCTTCCACGGGGCTTACCGACATCCTCGGCGTGAATCCCCTCGTCGGGGCGTTGATTTACGGCCTCGCCATTCCACGAGGAAGCTTCACAGAGATGTTGATGGAGAGATCGGATGATTTTGGATCTAGATACTTAGCACCCTTGTTCTTTTTCAGTGGTGGCTTGAGGTGCAATATAGTTAAGGTTTTGCAGACTGTAGATTTGGGTTTTGTTGTTATAGTGATCTTGTCTATCTTCACAAAGATTGTTACAACATTTGCAGTTACTCGCTACTATGGTATGCCTTTCAGAGAGAGTTTGGCTTTTGGGTTGCTTATGAACACCAAAGGCGTCTTGTCACTCATAGTGCTCAACATTGCATGGGATAATAAGGTGCTTATAAGTGCATATGCATTCTCAATCATGACACTTAATATTCTGATAATGACTTTCATGGTGTCTCCAATAATCAACGTCATTTACAGGCCAAAAACGGCCTATAGGATGAACCTGCTAAGGACCATACAAAACCTAGGATTTCAAACAGAAGTTCGAATCTTGGTTTGTGTGCACAATCCTCGCCATGCCAGCGGAATGGTGAATATCCTAGAAGCCTTAAGTGGTATCAGTGTCTCCTCTTTGCGAGTGACAGCAGTTCAACTCGTTGAGCTCAAAGGTCGTGTCACTAGCCTTGTCTCTGCTCAACTCGAGCATCAAAGCTCGCTCGGATTCTCACAATCACAATCACAATCACAATCATTTGAGGACATGGAAACGATAGCAAGTCATTTCCATTTCTTTGCACAAGTGCATAGCGGCAACCATGCTGAAACCAGCATGATCATGTCACCTTTTGCGACGATTAACCGTGACATATACAATCTAGCAATGGAGAAACAAGCATCATTGGTACTCCTTCCTTTTCACAAGCACTGGAGCTCCGAAGGCAACCTAGAAGTAACCAAAGAAGTGTTTAGCGAGATAAACCAGAATGTGATGAAAGATGCGCCATGCTCCGTGGGGATCTTCGTTGATCGCGGCCTTAATTCATTGTTGAATGCCAATTTGCACATCATCATGTTATTCATTGGGGGTCCTGATGATCGCGAAGCCTTGGCTATTGCGTGGAGGATGGCAGGACACCACAGGATACAACTCACTATGGTGAGGATTATTTTGTGTGGCAAGGCTGCAATGGAGGATCAAAAAAAGGAATCTGGCCATGAGGAACTACTATCAGCAGTGCTAGATAAGAATAAGGAACGAGAGTTGGATGATAGCTGTGTGAATAATTTTAGGATTATGGGAGTGAACAATAAGGATACAATAAAGTATGAAGAGAGATATGTGGAAAGTGATGATGATATCCCTAGAGTGGTTAATGAATTTGATCAAAAGCGTTATGATTTATATGTTTTGGGACAAGGGAAAGGTAGGCACTCAAGGGTGTTGTCYGAAATGTTGGATTGGACTGATTTCCCTGAACTAGGTGTTATTGGGGACTTAGTGGCATCAAATAGCTTTGGTTCCTACTCTTCTGTGCTTGTTGTACAGCAATATGGGTATGGAGGAATGGAATTTGGTAAAAATTATGAGAACAATCCTAGTTGTTATCCTCCTCCTATTCGCAAACCACCTTCAAGGACAAGATCATTAAGTAGAATGTTTTGA 2418 0.4074 DLLKNYLPIFIYETITVVFSSRLVYYLLRPLSQPHLVSDLLAGMLLSSIFQLGGSNKLFQDFLPIQILLAVSTIAQVGLIFYVFMAGLEMNLDFVLRAPKKPTIIAICSTLIPMILGTGIYSLVIIVDKKFLKNYVETYEYNRPQCYFIWSMVLSITGFPVLANILVDLKLLYTRLGKLALTVATHNDFYNWIMFALVFPFLVNGYRAIFSMLCVIAFILLSHFVLRPLLEKIVAKKPNKHDWTNYQLSFVIMGLFASTGLTDILGVNPLVGALIYGLAIPRGSFTEMLMERSDDFGSRYLAPLFFFSGGLRCNIVKVLQTVDLGFVVIVILSIFTKIVTTFAVTRYYGMPFRESLAFGLLMNTKGVLSLIVLNIAWDNKVLISAYAFSIMTLNILIMTFMVSPIINVIYRPKTAYRMNLLRTIQNLGFQTEVRILVCVHNPRHASGMVNILEALSGISVSSLRVTAVQLVELKGRVTSLVSAQLEHQSSLGFSQSQSQSQSFEDMETIASHFHFFAQVHSGNHAETSMIMSPFATINRDIYNLAMEKQASLVLLPFHKHWSSEGNLEVTKEVFSEINQNVMKDAPCSVGIFVDRGLNSLLNANLHIIMLFIGGPDDREALAIAWRMAGHHRIQLTMVRIILCGKAAMEDQKKESGHEELLSAVLDKNKERELDDSCVNNFRIMGVNNKDTIKYEERYVESDDDIPRVVNEFDQKRYDLYVLGQGKGRHSRVLSEMLDWTDFPELGVIGDLVASNSFGSYSSVLVVQQYGYGGMEFGKNYENNPSCYPPPIRKPPSRTRSLSRMF* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g0293 805 Gene3D - 9 417 IPR038770 -
Amo01g0293 805 PANTHER CATION/H + ANTIPORTER 4 783 - -
Amo01g0293 805 Pfam Sodium/hydrogen exchanger family 15 405 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo01g0293 805 PANTHER CATION/H+ EXCHANGER 3 4 783 - -
Amo01g0293 805 MobiDBLite consensus disorder prediction 783 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g0293 Amo-Chr1 4777569 4781249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g0293 27 784 Antiporter Super Family AT2G13620 34.153 2.58e-146 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g0293 - - ahf:112711086 1469.14